Sakowv30022291m.g (Saccoglossus kowalevskii)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 Sakowv30022291m.g T334348_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
23937169_peptide Sox 440 505
23937170_peptide Sox 440 503

Links

Other Sox family TFs
Other Saccoglossus kowalevskii TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPU_000793 Strongylocentrotus purpuratus SPU_000793 N 0.475
SMAR009610 Strigamia maritima SMAR009610 N 0.466
CGI_10027966 Crassostrea gigas CGI_10027966 N 0.460
RSKR_0000620800 Rhabditophanes kr3021 RSKR_0000620800 N 0.459
ISCW008318 Ixodes scapularis ISCW008318 N 0.455
EFV52201 Trichinella spiralis EFV52201 N 0.440
AMTR_s00023p00232620 Amborella trichopoda AMTR_s00023p00232620 N 0.436
MESCA011128 Megaselia scalaris MESCA011128 N 0.432
CapteG128587 Capitella teleta CapteG128587 N 0.429
PTRK_0001310900 Parastrongyloides trichosuri PTRK_0001310900 N 0.427
SPAL_0001274100 Strongyloides papillosus SPAL_0001274100 N 0.427
SSTP_0001127200 Strongyloides stercoralis SSTP_0001127200 N 0.427
SVE_0827400 Strongyloides venezuelensis SVE_0827400 N 0.427
LLOJ004028 Lutzomyia longipalpis LLOJ004028 N 0.425
LLOJ007360 Lutzomyia longipalpis LLOJ007360 N 0.425
PPAI002532 Phlebotomus papatasi PPAI002532 N 0.425
PPAI008460 Phlebotomus papatasi PPAI008460 N 0.425
L898_g14011 Steinernema monticolum L898_g14011 N 0.424
NV11063 Nasonia vitripennis NV11063 N 0.422
SSTP_0000878000 Strongyloides stercoralis SSTP_0000878000 N 0.420
L798_00141 Zootermopsis nevadensis L798_00141 N 0.415