CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SPU_015456 *(Strongylocentrotus purpuratus)* Nuclear receptor
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00105 (zf-C4)	IPR001628	SPU_015456	T306047_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hr39 M03942_2.00	Drosophila melanogaster	CAAGGHCRN	NYGDCCTTG	SELEX Nitta et al.(2015) Hr39_1	0.802	0.486
Hr39 M03943_2.00	Drosophila melanogaster	CAAGGYCRH	DYGRCCTTG	SELEX Nitta et al.(2015) Hr39_2	0.802	0.486
nhr-25 M08226_2.00	Caenorhabditis elegans	MAAGGTCA	TGACCTTK	ChIP-seq Contrino et al.(2012) Mw160	0.773	0.500
ftz-f1 M02407_2.00	Drosophila melanogaster	RRGGTCAH	DTGACCYY	PBM Weirauch et al.(2014) pTH5709	0.773	0.529
ftz-f1 M06417_2.00	Drosophila melanogaster	MMRKYYSAAGGWCRCYGM	KCRGYGWCCTTSRRMYKK	B1H Zhu et al.(2011) ftz-f1_FlyReg_FBgn0001078	0.773	0.529
ftz-f1 M06418_2.00	Drosophila melanogaster	AAGGTCA	TGACCTT	B1H Zhu et al.(2011) ftz-f1_SANGER_5_FBgn0001078	0.773	0.529
For this family, TFs with SR scores > 0.745* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
SPU_015456-tr	Nuclear receptor	53	122	QKCLVCGDKASGLHYTVVSCESCKSFFGRKIKSKAKFTCEANGNCVMDLYTRRHCPACRLQKCLDVGMKP

Links
Other Nuclear receptor family TFs
Other *Strongylocentrotus purpuratus* TFs