Aan_R009572 (Calypte anna)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Aan_R009572 T306462_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VDR
M03363_2.00 		Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC		 SELEX
Jolma et al.(2013)
VDR_1 		0.990 0.971
Vdr
M03429_2.00 		Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY		 SELEX
Jolma et al.(2013)
Vdr_1 		0.990 0.971
VDR
M05877_2.00 		Homo sapiens
HRRGTTCA
TGAACYYD		 SMiLE-seq
Isakova et al.(2017)
VDR 		0.990 0.971
VDR
M09269_2.00 		Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A 		0.990 0.971
Vdr
M09315_2.00 		Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A 		0.990 0.971
VDR
M09606_2.00 		Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN		 Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484 		0.990 0.971
VDR
M11116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q3 		0.990 0.971
VDR
M11117_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6_01 		0.990 0.971
VDR
M11118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6 		0.990 0.971
ENSPMAG00000000180
M02403_2.00 		Petromyzon marinus
RGKWCRN
NYGWMCY		 PBM
Weirauch et al.(2014)
pTH5509 		0.985 0.857
NR1I2
M03925_2.00 		Homo sapiens
RGKKCRNNVRGKKCR
YGMMCYBNNYGMMCY		 SELEX
Nitta et al.(2015)
NR1I2_1 		0.936 0.657
NR1I2
M05625_2.00 		Homo sapiens
VRGTTCRNNSRGKTCRH
DYGAMCYSNNYGAACYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX 		0.936 0.657
NR1I2
M09283_2.00 		Homo sapiens
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C 		0.936 0.657
NR1I2
M05626_2.00 		Homo sapiens
VRGKKCRNNVRGKKCRN
NYGMMCYBNNYGMMCYB		 SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX 		0.936 0.657
ENSGALG00000028624
M02398_2.00 		Gallus gallus
GRGKTCAH
DTGAMCYC		 PBM
Weirauch et al.(2014)
pTH6492 		0.933 0.643
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.852 0.543
Nr1i3
M09302_2.00 		Mus musculus
DRGGTCANNNRAGTTYAN
NTRAACTYNNNTGACCYH		 Misc
Kulakovskiy et al.(2013)
NR1I3_MOUSE.H11MO.0.C 		0.845 0.600
Nr1i2
M09316_2.00 		Mus musculus
DDRRBTYMDNNRAGKTCAN
NTGAMCTYNNHKRAVYYHH		 Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C 		0.841 0.629
NR1I3
M03924_2.00 		Homo sapiens
RGKDYRNNNNRGKKYR
YRMMCYNNNNYRHMCY		 SELEX
Nitta et al.(2015)
NR1I3_1 		0.825 0.629
NR1I3
M05619_2.00 		Homo sapiens
WDAGTTCAH
DTGAACTHW		 SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX 		0.825 0.629
NR1I3
M09281_2.00 		Homo sapiens
DRGGTCANNNRAGTTYAN
NTRAACTYNNNTGACCYH		 Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C 		0.825 0.629
NR1I3
M05620_2.00 		Homo sapiens
WDAGTTCRN
NYGAACTHW		 SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX 		0.825 0.629
NR1H4
M00368_2.00 		Homo sapiens
NVRGGTCANN
NNTGACCYBN		 PBM
Barrera et al.(2016)
NR1H4_REF 		0.799 0.529
NR1H4
M05876_2.00 		Homo sapiens
DRGKTCAHHKD
HMDDTGAMCYH		 SMiLE-seq
Isakova et al.(2017)
NR1H4 		0.799 0.529
NR1H4
M08152_2.00 		Homo sapiens
NNGGTCATTNN
NNAATGACCNN		 ChIP-seq
Mathelier et al.(2014)
MA1110.1 		0.799 0.529
NR1H4
M09263_2.00 		Homo sapiens
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_HUMAN.H11MO.0.B 		0.799 0.529
Nr1h4
M09332_2.00 		Mus musculus
CCBVNVGGYCRBTGMCCYB
VRGGKCAVYGRCCBNBVGG		 Misc
Kulakovskiy et al.(2013)
NR1H4_MOUSE.H11MO.0.A 		0.799 0.529
Nr1h4
M09618_2.00 		Mus musculus
NRGGBCANTGVCCY
RGGBCANTGVCCYN		 Misc
Heinz et al.(2010)
Liver-FXR_Chong_et_al. 		0.799 0.529
NR1H4
M11086_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q2 		0.799 0.529
NR1H4
M11087_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q3 		0.799 0.529
NR1H4
M11088_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXR_Q5 		0.799 0.529
NR1H4
M11089_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRRXR_Q5 		0.799 0.529
NR1H4
M00367_2.00 		Homo sapiens
NNNTWTTATDHNN
NNDHATAAWANNN		 PBM
Barrera et al.(2016)
NR1H4_C144R 		0.799 0.514
nr1h5.S
M11194_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FXRIR1_Q6 		0.761 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R009572 Nuclear receptor 23 92

Links

Other Nuclear receptor family TFs
Other Calypte anna TFs

392 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000747 Calypte anna Aan_R000747 I
Afo_R010378 Aptenodytes forsteri Afo_R010378 I
Alligator_sinensis_CCG015253.1 Alligator sinensis Alligator_sinensis_CCG015253.1 I
Alligator_sinensis_CCG019028.1 Alligator sinensis Alligator_sinensis_CCG019028.1 I
BGLB003718 Biomphalaria glabrata BGLB003718 I
Brh_R004046 Buceros rhinoceros Brh_R004046 I
Brh_R008908 Buceros rhinoceros Brh_R008908 I
CapteG49381 Capitella teleta CapteG49381 I
Cmyd_10006869 Chelonia mydas Cmyd_10006869 I
Cmyd_10010656 Chelonia mydas Cmyd_10010656 I
TAL2 Anolis carolinensis ENSACAG00000004545 I
ENSACAG00000005980 Anolis carolinensis ENSACAG00000005980 I
ENSACAG00000017046 Anolis carolinensis ENSACAG00000017046 I
ENSAMEG00000000014 Ailuropoda melanoleuca ENSAMEG00000000014 I
ENSAMEG00000012594 Ailuropoda melanoleuca ENSAMEG00000012594 I
ENSAMEG00000019057 Ailuropoda melanoleuca ENSAMEG00000019057 I
ENSAMXG00000011388 Astyanax mexicanus ENSAMXG00000011388 I
ENSAMXG00000017924 Astyanax mexicanus ENSAMXG00000017924 I
ENSAMXG00000025213 Astyanax mexicanus ENSAMXG00000025213 I
ENSAPLG00000000896 Anas platyrhynchos ENSAPLG00000000896 I
TAL1 Bos taurus ENSBTAG00000005029 I
LYL1 Bos taurus ENSBTAG00000019329 I
TAL2 Bos taurus ENSBTAG00000045852 I
ENSBTAP00000025739-D1 Bos grunniens ENSBTAP00000025739-D1 I
TAL1 Canis familiaris ENSCAFG00000004032 I
TAL2 Canis familiaris ENSCAFG00000032112 I
TAL1 Callithrix jacchus ENSCJAG00000021222 I
TAL2 Callithrix jacchus ENSCJAG00000022534 I
ENSCPOG00000003558 Cavia porcellus ENSCPOG00000003558 I
ENSCPOG00000008197 Cavia porcellus ENSCPOG00000008197 I
ENSCPOG00000024157 Cavia porcellus ENSCPOG00000024157 I
ENSCSAG00000000466 Chlorocebus sabaeus ENSCSAG00000000466 I
ENSCSAG00000001247 Chlorocebus sabaeus ENSCSAG00000001247 I
ENSCSAG00000006504 Chlorocebus sabaeus ENSCSAG00000006504 I
tal1 Danio rerio ENSDARG00000019930 I
tal2 Danio rerio ENSDARG00000042041 I
CABZ01066696.1 Danio rerio ENSDARG00000091603 I
TAL2 Dasypus novemcinctus ENSDNOG00000006670 I
ENSDNOG00000043562 Dasypus novemcinctus ENSDNOG00000043562 I
TAL1 Dasypus novemcinctus ENSDNOG00000047501 I
ENSDORG00000004570 Dipodomys ordii ENSDORG00000004570 I
Tal2 Dipodomys ordii ENSDORG00000012882 I
ENSECAG00000018746 Equus caballus ENSECAG00000018746 I
TAL2 Erinaceus europaeus ENSEEUG00000003187 I
TAL2 Echinops telfairi ENSETEG00000007386 I
ENSETEG00000008816 Echinops telfairi ENSETEG00000008816 I
ENSFALG00000009303 Ficedula albicollis ENSFALG00000009303 I
ENSFALG00000015243 Ficedula albicollis ENSFALG00000015243 I
TAL2 Felis catus ENSFCAG00000008052 I
ENSFCAG00000031106 Felis catus ENSFCAG00000031106 I
LYL1 Homo sapiens ENSG00000104903 D
TAL1 Homo sapiens ENSG00000162367 D
TAL2 Homo sapiens ENSG00000186051 I
tal1 Gasterosteus aculeatus ENSGACG00000013846 I
tal2 Gasterosteus aculeatus ENSGACG00000013904 I
tal1 Gasterosteus aculeatus ENSGACG00000019476 I
TAL2 Gallus gallus ENSGALG00000023114 I
TAL1 Gallus gallus ENSGALG00000023296 I
TAL2 Gorilla gorilla ENSGGOG00000006780 I
TAL1 Gorilla gorilla ENSGGOG00000011776 I
LYL1 Gorilla gorilla ENSGGOG00000023512 I
ENSGMOG00000005856 Gadus morhua ENSGMOG00000005856 I
ENSGMOG00000012044 Gadus morhua ENSGMOG00000012044 I
ENSGMOG00000019785 Gadus morhua ENSGMOG00000019785 I
ENSLACG00000011366 Latimeria chalumnae ENSLACG00000011366 I
ENSLACG00000017036 Latimeria chalumnae ENSLACG00000017036 I
LYL1 Loxodonta africana ENSLAFG00000005235 I
TAL2 Loxodonta africana ENSLAFG00000008309 I
TAL1 Loxodonta africana ENSLAFG00000013880 I
ENSLOCG00000007669 Lepisosteus oculatus ENSLOCG00000007669 I
ENSLOCG00000009966 Lepisosteus oculatus ENSLOCG00000009966 I
ENSLOCG00000017967 Lepisosteus oculatus ENSLOCG00000017967 I
ENSMEUG00000008559 Macropus eugenii ENSMEUG00000008559 I
ENSMEUG00000011615 Macropus eugenii ENSMEUG00000011615 I
ENSMGAG00000010823 Meleagris gallopavo ENSMGAG00000010823 I
ENSMICG00000001720 Microcebus murinus ENSMICG00000001720 I
ENSMLUG00000006388 Myotis lucifugus ENSMLUG00000006388 I
TAL2 Myotis lucifugus ENSMLUG00000008792 I
LYL1 Myotis lucifugus ENSMLUG00000012805 I
LYL1 Macaca mulatta ENSMMUG00000001166 I
TAL2 Macaca mulatta ENSMMUG00000002671 I
ENSMMUG00000017870 Macaca mulatta ENSMMUG00000017870 I
TAL1 Monodelphis domestica ENSMODG00000001502 I
LYL1 Monodelphis domestica ENSMODG00000011593 I
TAL2 Monodelphis domestica ENSMODG00000022957 I
ENSMPUG00000004316 Mustela putorius furo ENSMPUG00000004316 I
ENSMPUG00000012410 Mustela putorius furo ENSMPUG00000012410 I
Tal2 Mus musculus ENSMUSG00000028417 I
Tal1 Mus musculus ENSMUSG00000028717 D
Lyl1 Mus musculus ENSMUSG00000034041 D
ENSNLEG00000013010 Nomascus leucogenys ENSNLEG00000013010 I
ENSNLEG00000016398 Nomascus leucogenys ENSNLEG00000016398 I
ENSNLEG00000018969 Nomascus leucogenys ENSNLEG00000018969 I
TAL2 Ornithorhynchus anatinus ENSOANG00000004194 I
LYL1 Ornithorhynchus anatinus ENSOANG00000006846 I
ENSOANG00000032005 Ornithorhynchus anatinus ENSOANG00000032005 I
ENSOARG00000003039 Ovis aries ENSOARG00000003039 I
ENSOARG00000003450 Ovis aries ENSOARG00000003450 I
ENSOARG00000009454 Ovis aries ENSOARG00000009454 I
TAL1 Oryctolagus cuniculus ENSOCUG00000017248 I
TAL2 Otolemur garnettii ENSOGAG00000009225 I
ENSOGAG00000016551 Otolemur garnettii ENSOGAG00000016551 I
LYL1 Otolemur garnettii ENSOGAG00000033339 I
ENSONIG00000009960 Oreochromis niloticus ENSONIG00000009960 I
ENSONIG00000018071 Oreochromis niloticus ENSONIG00000018071 I
ENSONIG00000021296 Oreochromis niloticus ENSONIG00000021296 I
TAL1 Ochotona princeps ENSOPRG00000004033 I
TAL2 Ochotona princeps ENSOPRG00000013838 I
tal2 Oryzias latipes ENSORLG00000000466 I
tal1 Oryzias latipes ENSORLG00000003776 I
ENSORLG00000013953 Oryzias latipes ENSORLG00000013953 I
tal1 Oryzias latipes ENSORLG00000016044 I
ENSP00000334547 Macaca fascicularis ENSP00000334547 I
ENSP00000334547-D1 Bos grunniens ENSP00000334547-D1 I
ENSP00000360950 Macaca fascicularis ENSP00000360950 I
ENSP00000360950-D1 Bos grunniens ENSP00000360950-D1 I
ENSPANG00000009893 Papio anubis ENSPANG00000009893 I
ENSPANG00000014670 Papio anubis ENSPANG00000014670 I
ENSPANG00000017357 Papio anubis ENSPANG00000017357 I
LYL1 Procavia capensis ENSPCAG00000003676 I
TAL2 Procavia capensis ENSPCAG00000004449 I
TAL1 Procavia capensis ENSPCAG00000006179 I
ENSPFOG00000005195 Poecilia formosa ENSPFOG00000005195 I
ENSPFOG00000013394 Poecilia formosa ENSPFOG00000013394 I
ENSPFOG00000020678 Poecilia formosa ENSPFOG00000020678 I
ENSPMAG00000002259 Petromyzon marinus ENSPMAG00000002259 I
ENSPPYG00000009621 Pongo abelii ENSPPYG00000009621 I
ENSPSIG00000000318 Pelodiscus sinensis ENSPSIG00000000318 I
ENSPSIG00000010614 Pelodiscus sinensis ENSPSIG00000010614 I
TAL1 Pan troglodytes ENSPTRG00000000710 I
TAL2 Pan troglodytes ENSPTRG00000021225 I
ENSPVAG00000005351 Pteropus vampyrus ENSPVAG00000005351 I
TAL2 Pteropus vampyrus ENSPVAG00000005744 I
LYL1 Pteropus vampyrus ENSPVAG00000015075 I
Lyl1 Rattus norvegicus ENSRNOG00000002950 I
Tal1 Rattus norvegicus ENSRNOG00000025051 I
Tal2 Rattus norvegicus ENSRNOG00000028082 I
ENSSHAG00000010681 Sarcophilus harrisii ENSSHAG00000010681 I
ENSSHAG00000014421 Sarcophilus harrisii ENSSHAG00000014421 I
ENSSHAG00000015614 Sarcophilus harrisii ENSSHAG00000015614 I
ENSSSCG00000013743 Sus scrofa ENSSSCG00000013743 I
ENSSSCG00000026460 Sus scrofa ENSSSCG00000026460 I
ENSSTOG00000008396 Ictidomys tridecemlineatus ENSSTOG00000008396 I
ENSSTOG00000026950 Ictidomys tridecemlineatus ENSSTOG00000026950 I
ENSSTOG00000028401 Ictidomys tridecemlineatus ENSSTOG00000028401 I
ENSTGUG00000006333 Taeniopygia guttata ENSTGUG00000006333 I
TAL1 Taeniopygia guttata ENSTGUG00000008542 I
ENSTGUG00000018537 Taeniopygia guttata ENSTGUG00000018537 I
tal1 Tetraodon nigroviridis ENSTNIG00000001525 I
tal1 Tetraodon nigroviridis ENSTNIG00000006133 I
ENSTRUG00000004487 Takifugu rubripes ENSTRUG00000004487 I
tal1 Takifugu rubripes ENSTRUG00000008218 I
tal2 Takifugu rubripes ENSTRUG00000016731 I
ENSTSYG00000009754 Tarsius syrichta ENSTSYG00000009754 I
TAL2 Tursiops truncatus ENSTTRG00000003494 I
LYL1 Tursiops truncatus ENSTTRG00000006376 I
TAL1 Tursiops truncatus ENSTTRG00000011653 I
TAL1 Vicugna pacos ENSVPAG00000004268 I
ENSXMAG00000007215 Xiphophorus maculatus ENSXMAG00000007215 I
ENSXMAG00000015686 Xiphophorus maculatus ENSXMAG00000015686 I
ENSXMAG00000020363 Xiphophorus maculatus ENSXMAG00000020363 I
Gfo_R006237 Geospiza fortis Gfo_R006237 I
Gfo_R009231 Geospiza fortis Gfo_R009231 I
gw.349.31.1 Branchiostoma floridae gw.349.31.1 I
HelroG81338 Helobdella robusta HelroG81338 I
ISCW010324 Ixodes scapularis ISCW010324 I
LCUP012404 Lucilia cuprina LCUP012404 N
MDOA013066 Musca domestica MDOA013066 N
Myotis_brandtii_LYL1_10009227 Myotis brandtii Myotis_brandtii_LYL1_10009227 I
Myotis_brandtii_TAL1_10003055 Myotis brandtii Myotis_brandtii_TAL1_10003055 I
Myotis_brandtii_TMEM38B_10031594 Myotis brandtii Myotis_brandtii_TMEM38B_10031594 I
Ogr06402 Ophisaurus gracilis Ogr06402 I
Ogr13537 Ophisaurus gracilis Ogr13537 I
Ogr15798 Ophisaurus gracilis Ogr15798 I
Pvit_02813 Pogona vitticeps Pvit_02813 I
Pvit_09175 Pogona vitticeps Pvit_09175 I
Pvit_14582 Pogona vitticeps Pvit_14582 I
Sakowv30007933m.g Saccoglossus kowalevskii Sakowv30007933m.g I
SMAR000405 Strigamia maritima SMAR000405 I
Tal_R009538 Tyto alba Tal_R009538 I
tal1 Xenopus tropicalis XB-GENE-479827 I
tal1.S Xenopus laevis XB-GENE-865312 I
lyl1 Xenopus tropicalis XB-GENE-940268 I
tal2 Xenopus tropicalis XB-GENE-965184 I