Gfo_R006237 (Geospiza fortis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gfo_R006237 T047326_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LYL1
M08714_2.00 		Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A 		0.892 0.808
TAL1
M08734_2.00 		Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV		 Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A 		0.870 0.865
Tal1
M08759_2.00 		Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV		 Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A 		0.870 0.865
Tal1
M09471_2.00 		Mus musculus
NVCWKMWG
CWKMWGBN		 Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511 		0.870 0.865
Tal1
M09472_2.00 		Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR		 Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720 		0.870 0.865
TAL1
M09870_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_01 		0.870 0.865
TAL1
M09871_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6_01 		0.870 0.865
TAL1
M09872_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6 		0.870 0.865
Lyl1
M08763_2.00 		Mus musculus
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_MOUSE.H11MO.0.A 		0.856 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006237 bHLH 3 55

Links

Other bHLH family TFs
Other Geospiza fortis TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TAL2 Anolis carolinensis ENSACAG00000004545 I 0.914
ENSAMEG00000019057 Ailuropoda melanoleuca ENSAMEG00000019057 I 0.914
TAL2 Bos taurus ENSBTAG00000045852 I 0.914
TAL2 Canis familiaris ENSCAFG00000032112 I 0.914
TAL2 Callithrix jacchus ENSCJAG00000022534 I 0.914
ENSCPOG00000008197 Cavia porcellus ENSCPOG00000008197 I 0.914
ENSCSAG00000000466 Chlorocebus sabaeus ENSCSAG00000000466 I 0.914
TAL2 Dasypus novemcinctus ENSDNOG00000006670 I 0.914
Tal2 Dipodomys ordii ENSDORG00000012882 I 0.914
TAL2 Equus caballus ENSECAG00000004995 I 0.914
TAL2 Echinops telfairi ENSETEG00000007386 I 0.914
TAL2 Felis catus ENSFCAG00000008052 I 0.914
TAL2 Homo sapiens ENSG00000186051 I 0.914
TAL2 Gallus gallus ENSGALG00000023114 I 0.914
TAL2 Gorilla gorilla ENSGGOG00000006780 I 0.914
TAL2 Loxodonta africana ENSLAFG00000008309 I 0.914
ENSLOCG00000017967 Lepisosteus oculatus ENSLOCG00000017967 I 0.914
ENSMICG00000001720 Microcebus murinus ENSMICG00000001720 I 0.914
TAL2 Myotis lucifugus ENSMLUG00000008792 I 0.914
TAL2 Macaca mulatta ENSMMUG00000002671 I 0.914
ENSNLEG00000018969 Nomascus leucogenys ENSNLEG00000018969 I 0.914
TAL2 Ornithorhynchus anatinus ENSOANG00000004194 I 0.914
ENSOARG00000003039 Ovis aries ENSOARG00000003039 I 0.914
TAL2 Otolemur garnettii ENSOGAG00000009225 I 0.914
TAL2 Ochotona princeps ENSOPRG00000013838 I 0.914
ENSPANG00000017357 Papio anubis ENSPANG00000017357 I 0.914
ENSPSIG00000000318 Pelodiscus sinensis ENSPSIG00000000318 I 0.914
TAL2 Pan troglodytes ENSPTRG00000021225 I 0.914
TAL2 Pteropus vampyrus ENSPVAG00000005744 I 0.914
ENSSTOG00000026950 Ictidomys tridecemlineatus ENSSTOG00000026950 I 0.914
ENSTGUG00000006333 Taeniopygia guttata ENSTGUG00000006333 I 0.914
ENSTGUG00000018537 Taeniopygia guttata ENSTGUG00000018537 I 0.914
ENSTSYG00000009754 Tarsius syrichta ENSTSYG00000009754 I 0.914
TAL2 Tursiops truncatus ENSTTRG00000003494 I 0.914
Alligator_sinensis_CCG015253.1 Alligator sinensis Alligator_sinensis_CCG015253.1 I 0.914
Brh_R004046 Buceros rhinoceros Brh_R004046 I 0.914
Cmyd_10010656 Chelonia mydas Cmyd_10010656 I 0.914
ENSP00000334547-D1 Bos grunniens ENSP00000334547-D1 I 0.914
ENSP00000334547 Macaca fascicularis ENSP00000334547 I 0.914
Ogr15798 Ophisaurus gracilis Ogr15798 I 0.914
Pvit_09175 Pogona vitticeps Pvit_09175 I 0.914
Tal_R009538 Tyto alba Tal_R009538 I 0.914
ENSACAG00000017046 Anolis carolinensis ENSACAG00000017046 I 0.894
ENSAMXG00000011388 Astyanax mexicanus ENSAMXG00000011388 I 0.894
TAL2 Erinaceus europaeus ENSEEUG00000003187 I 0.894
ENSFALG00000015243 Ficedula albicollis ENSFALG00000015243 I 0.894
ENSLOCG00000007669 Lepisosteus oculatus ENSLOCG00000007669 I 0.894
TAL2 Monodelphis domestica ENSMODG00000022957 I 0.894
TAL2 Procavia capensis ENSPCAG00000004449 I 0.894
Ogr06402 Ophisaurus gracilis Ogr06402 I 0.894
Pvit_14582 Pogona vitticeps Pvit_14582 I 0.894
lyl1 Xenopus tropicalis XB-GENE-940268 I 0.894
ENSAMEG00000012594 Ailuropoda melanoleuca ENSAMEG00000012594 I 0.892
LYL1 Bos taurus ENSBTAG00000019329 I 0.892
ENSCPOG00000024157 Cavia porcellus ENSCPOG00000024157 I 0.892
ENSCSAG00000006504 Chlorocebus sabaeus ENSCSAG00000006504 I 0.892
ENSDNOG00000043562 Dasypus novemcinctus ENSDNOG00000043562 I 0.892
LYL1 Homo sapiens ENSG00000104903 D 0.892
LYL1 Gorilla gorilla ENSGGOG00000023512 I 0.892
LYL1 Loxodonta africana ENSLAFG00000005235 I 0.892
LYL1 Myotis lucifugus ENSMLUG00000012805 I 0.892
LYL1 Macaca mulatta ENSMMUG00000001166 I 0.892
ENSMPUG00000004316 Mustela putorius furo ENSMPUG00000004316 I 0.892
ENSNLEG00000013010 Nomascus leucogenys ENSNLEG00000013010 I 0.892
LYL1 Ornithorhynchus anatinus ENSOANG00000006846 I 0.892
ENSOARG00000009454 Ovis aries ENSOARG00000009454 I 0.892
LYL1 Otolemur garnettii ENSOGAG00000033339 I 0.892
ENSPANG00000014670 Papio anubis ENSPANG00000014670 I 0.892
LYL1 Procavia capensis ENSPCAG00000003676 I 0.892
ENSPMAG00000002259 Petromyzon marinus ENSPMAG00000002259 I 0.892
ENSPPYG00000009621 Pongo abelii ENSPPYG00000009621 I 0.892
LYL1 Pteropus vampyrus ENSPVAG00000015075 I 0.892
ENSSSCG00000013743 Sus scrofa ENSSSCG00000013743 I 0.892
ENSSTOG00000028401 Ictidomys tridecemlineatus ENSSTOG00000028401 I 0.892
LYL1 Tursiops truncatus ENSTTRG00000006376 I 0.892
ENSBTAP00000025739-D1 Bos grunniens ENSBTAP00000025739-D1 I 0.892
Myotis_brandtii_LYL1_10009227 Myotis brandtii Myotis_brandtii_LYL1_10009227 I 0.892
tal2 Xenopus tropicalis XB-GENE-965184 I 0.890
tal1 Gasterosteus aculeatus ENSGACG00000019476 I 0.883
ENSONIG00000018071 Oreochromis niloticus ENSONIG00000018071 I 0.883
tal1 Oryzias latipes ENSORLG00000003776 I 0.883
ENSPFOG00000013394 Poecilia formosa ENSPFOG00000013394 I 0.883
tal1 Tetraodon nigroviridis ENSTNIG00000006133 I 0.883
ENSTRUG00000004487 Takifugu rubripes ENSTRUG00000004487 I 0.883
ENSXMAG00000007215 Xiphophorus maculatus ENSXMAG00000007215 I 0.883
Tal2 Rattus norvegicus ENSRNOG00000028082 I 0.879
Sakowv30007933m.g Saccoglossus kowalevskii Sakowv30007933m.g I 0.872
ENSACAG00000005980 Anolis carolinensis ENSACAG00000005980 I 0.870
ENSAMEG00000000014 Ailuropoda melanoleuca ENSAMEG00000000014 I 0.870
ENSAMXG00000017924 Astyanax mexicanus ENSAMXG00000017924 I 0.870
ENSAMXG00000025213 Astyanax mexicanus ENSAMXG00000025213 I 0.870
ENSAPLG00000000896 Anas platyrhynchos ENSAPLG00000000896 I 0.870
TAL1 Bos taurus ENSBTAG00000005029 I 0.870
TAL1 Canis familiaris ENSCAFG00000004032 I 0.870
TAL1 Callithrix jacchus ENSCJAG00000021222 I 0.870
ENSCPOG00000003558 Cavia porcellus ENSCPOG00000003558 I 0.870
ENSCSAG00000001247 Chlorocebus sabaeus ENSCSAG00000001247 I 0.870
tal1 Danio rerio ENSDARG00000019930 I 0.870
tal2 Danio rerio ENSDARG00000042041 I 0.870
CABZ01066696.1 Danio rerio ENSDARG00000091603 I 0.870
TAL1 Dasypus novemcinctus ENSDNOG00000047501 I 0.870
ENSDORG00000004570 Dipodomys ordii ENSDORG00000004570 I 0.870
ENSECAG00000018746 Equus caballus ENSECAG00000018746 I 0.870
ENSETEG00000008816 Echinops telfairi ENSETEG00000008816 I 0.870
ENSFALG00000009303 Ficedula albicollis ENSFALG00000009303 I 0.870
ENSFCAG00000031106 Felis catus ENSFCAG00000031106 I 0.870
TAL1 Homo sapiens ENSG00000162367 D 0.870
tal1 Gasterosteus aculeatus ENSGACG00000013846 I 0.870
tal2 Gasterosteus aculeatus ENSGACG00000013904 I 0.870
TAL1 Gallus gallus ENSGALG00000023296 I 0.870
TAL1 Gorilla gorilla ENSGGOG00000011776 I 0.870
ENSGMOG00000005856 Gadus morhua ENSGMOG00000005856 I 0.870
ENSGMOG00000019785 Gadus morhua ENSGMOG00000019785 I 0.870
ENSLACG00000011366 Latimeria chalumnae ENSLACG00000011366 I 0.870
ENSLACG00000017036 Latimeria chalumnae ENSLACG00000017036 I 0.870
TAL1 Loxodonta africana ENSLAFG00000013880 I 0.870
ENSLOCG00000009966 Lepisosteus oculatus ENSLOCG00000009966 I 0.870
ENSMEUG00000011615 Macropus eugenii ENSMEUG00000011615 I 0.870
ENSMGAG00000010823 Meleagris gallopavo ENSMGAG00000010823 I 0.870
ENSMLUG00000006388 Myotis lucifugus ENSMLUG00000006388 I 0.870
ENSMMUG00000017870 Macaca mulatta ENSMMUG00000017870 I 0.870
TAL1 Monodelphis domestica ENSMODG00000001502 I 0.870
ENSMPUG00000012410 Mustela putorius furo ENSMPUG00000012410 I 0.870
Tal1 Mus musculus ENSMUSG00000028717 D 0.870
ENSNLEG00000016398 Nomascus leucogenys ENSNLEG00000016398 I 0.870
ENSOANG00000032005 Ornithorhynchus anatinus ENSOANG00000032005 I 0.870
ENSOARG00000003450 Ovis aries ENSOARG00000003450 I 0.870
TAL1 Oryctolagus cuniculus ENSOCUG00000017248 I 0.870
ENSOGAG00000016551 Otolemur garnettii ENSOGAG00000016551 I 0.870
ENSONIG00000009960 Oreochromis niloticus ENSONIG00000009960 I 0.870
ENSONIG00000021296 Oreochromis niloticus ENSONIG00000021296 I 0.870
TAL1 Ochotona princeps ENSOPRG00000004033 I 0.870
tal2 Oryzias latipes ENSORLG00000000466 I 0.870
tal1 Oryzias latipes ENSORLG00000016044 I 0.870
ENSPANG00000009893 Papio anubis ENSPANG00000009893 I 0.870
TAL1 Procavia capensis ENSPCAG00000006179 I 0.870
ENSPFOG00000005195 Poecilia formosa ENSPFOG00000005195 I 0.870
ENSPFOG00000020678 Poecilia formosa ENSPFOG00000020678 I 0.870
ENSPSIG00000010614 Pelodiscus sinensis ENSPSIG00000010614 I 0.870
TAL1 Pan troglodytes ENSPTRG00000000710 I 0.870
ENSPVAG00000005351 Pteropus vampyrus ENSPVAG00000005351 I 0.870
Tal1 Rattus norvegicus ENSRNOG00000025051 I 0.870
ENSSHAG00000010681 Sarcophilus harrisii ENSSHAG00000010681 I 0.870
ENSSHAG00000015614 Sarcophilus harrisii ENSSHAG00000015614 I 0.870
ENSSSCG00000026460 Sus scrofa ENSSSCG00000026460 I 0.870
ENSSTOG00000008396 Ictidomys tridecemlineatus ENSSTOG00000008396 I 0.870
TAL1 Taeniopygia guttata ENSTGUG00000008542 I 0.870
tal1 Tetraodon nigroviridis ENSTNIG00000001525 I 0.870
tal1 Takifugu rubripes ENSTRUG00000008218 I 0.870
tal2 Takifugu rubripes ENSTRUG00000016731 I 0.870
TAL1 Tursiops truncatus ENSTTRG00000011653 I 0.870
TAL1 Vicugna pacos ENSVPAG00000004268 I 0.870
ENSXMAG00000015686 Xiphophorus maculatus ENSXMAG00000015686 I 0.870
ENSXMAG00000020363 Xiphophorus maculatus ENSXMAG00000020363 I 0.870
Aan_R000747 Calypte anna Aan_R000747 I 0.870
Alligator_sinensis_CCG019028.1 Alligator sinensis Alligator_sinensis_CCG019028.1 I 0.870
Brh_R008908 Buceros rhinoceros Brh_R008908 I 0.870
Cmyd_10006869 Chelonia mydas Cmyd_10006869 I 0.870
ENSP00000360950-D1 Bos grunniens ENSP00000360950-D1 I 0.870
ENSP00000360950 Macaca fascicularis ENSP00000360950 I 0.870
Gfo_R009231 Geospiza fortis Gfo_R009231 I 0.870
Myotis_brandtii_TAL1_10003055 Myotis brandtii Myotis_brandtii_TAL1_10003055 I 0.870
Ogr13537 Ophisaurus gracilis Ogr13537 I 0.870
Pvit_02813 Pogona vitticeps Pvit_02813 I 0.870
tal1 Xenopus tropicalis XB-GENE-479827 I 0.870
tal1.S Xenopus laevis XB-GENE-865312 I 0.870
CapteG49381 Capitella teleta CapteG49381 I 0.868
gw.349.31.1 Branchiostoma floridae gw.349.31.1 I 0.868
ENSGMOG00000012044 Gadus morhua ENSGMOG00000012044 I 0.866
Tal2 Mus musculus ENSMUSG00000028417 I 0.859
ENSORLG00000013953 Oryzias latipes ENSORLG00000013953 I 0.859
Afo_R010378 Aptenodytes forsteri Afo_R010378 I 0.858
Myotis_brandtii_TMEM38B_10031594 Myotis brandtii Myotis_brandtii_TMEM38B_10031594 I 0.858
ENSMEUG00000008559 Macropus eugenii ENSMEUG00000008559 I 0.856
LYL1 Monodelphis domestica ENSMODG00000011593 I 0.856
Lyl1 Mus musculus ENSMUSG00000034041 D 0.856
Lyl1 Rattus norvegicus ENSRNOG00000002950 I 0.856
ENSSHAG00000014421 Sarcophilus harrisii ENSSHAG00000014421 I 0.856
HelroG81338 Helobdella robusta HelroG81338 I 0.856
ISCW010324 Ixodes scapularis ISCW010324 I 0.856
SMAR000405 Strigamia maritima SMAR000405 I 0.856
BGLB003718 Biomphalaria glabrata BGLB003718 I 0.856
LCUP012404 Lucilia cuprina LCUP012404 N 0.855
MDOA013066 Musca domestica MDOA013066 N 0.855