CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Alligator_sinensis_CCG003122.1
(
Alligator sinensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Alligator_sinensis_CCG003122.1
T306518_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003122.1
Nuclear receptor
6
46
RRLTAIRFPCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRK
Links
Other
Nuclear receptor
family TFs
Other
Alligator sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_07137
Colletotrichum fioriniae
CFIO01_07137
N
CGGC5_7955
Colletotrichum gloeosporioides
CGGC5_7955
N
CH063_10062
Colletotrichum higginsianum
CH063_10062
N
GLRG_06875
Colletotrichum graminicola
GLRG_06875
N
PV09_00498
Verruconis gallopava
PV09_00498
N
VDAG_03469
Verticillium dahliae
VDAG_03469
N
VDBG_06317
Verticillium albo atrum
VDBG_06317
N
VDBG_06317
Verticillium alfalfae
VDBG_06317
N