CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_06317
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_06317
T358017_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_06317T0
Zinc cluster
46
86
RACQQCQNRKIKCDIEQGQSRCARCTRMGLECVINKSLQTL
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_03469
Verticillium dahliae
VDAG_03469
N
0.683
VDBG_06317
Verticillium alfalfae
VDBG_06317
N
0.683
CFIO01_07137
Colletotrichum fioriniae
CFIO01_07137
N
0.552
CH063_10062
Colletotrichum higginsianum
CH063_10062
N
0.552
Cob_11280
Colletotrichum orbiculare
Cob_11280
N
0.552
GLRG_06875
Colletotrichum graminicola
GLRG_06875
N
0.552
CGGC5_7955
Colletotrichum gloeosporioides
CGGC5_7955
N
0.551