SMU15038277 (Schmidtea mediterranea)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMU15038277 T307210_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.845 0.700
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.845 0.700
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.845 0.700
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.845 0.700
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.845 0.700
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.845 0.700
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.845 0.700
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.845 0.700
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.845 0.700
dsf
M06431_2.00 		Drosophila melanogaster
AAAAGTCANH
DNTGACTTTT		 B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381 		0.768 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15038277 Nuclear receptor 32 101

Links

Other Nuclear receptor family TFs
Other Schmidtea mediterranea TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.845
AAEL005381 Aedes aegypti AAEL005381 I 0.778
PNRLIKE Aedes aegypti AAEL008043 I 0.970
AALB000508 Anopheles albimanus AALB000508 I 0.778
AALB002684 Anopheles albimanus AALB002684 I 0.970
Aan_R007044 Calypte anna Aan_R007044 I 0.845
AARA001809 Anopheles arabiensis AARA001809 I 0.970
AARA011806 Anopheles arabiensis AARA011806 I 0.778
AATE006105 Anopheles atroparvus AATE006105 I 0.970
AATE017601 Anopheles atroparvus AATE017601 I 0.778
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I 0.776
ACEP27077 Atta cephalotes ACEP27077 I 0.809
ACHR006241 Anopheles christyi ACHR006241 I 0.778
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I 0.776
ACOM032542 Anopheles coluzzii ACOM032542 I 0.778
ACOM033973 Anopheles coluzzii ACOM033973 I 0.970
ACUA020513 Anopheles culicifacies ACUA020513 I 0.970
ACYPI56792 Acyrthosiphon pisum ACYPI56792 I 0.774
ADIR010552 Anopheles dirus ADIR010552 I 0.970
ADIR011495 Anopheles dirus ADIR011495 I 0.778
AEPI001141 Anopheles epiroticus AEPI001141 I 0.970
AFAF007327 Anopheles farauti AFAF007327 I 0.778
AFAF018414 Anopheles farauti AFAF018414 I 0.970
AFUN001116 Anopheles funestus AFUN001116 I 0.970
AFUN008855 Anopheles funestus AFUN008855 I 0.778
AGAP001348 Anopheles gambiae AGAP001348 I 0.970
AGAP009575 Anopheles gambiae AGAP009575 I 0.778
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.845
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I 0.758
ALUE_0000688601 Ascaris lumbricoides ALUE_0000688601 I 0.975
AMAM020935 Anopheles maculatus AMAM020935 I 0.970
AMEC009570 Anopheles melas AMEC009570 I 0.778
AMEC010971 Anopheles melas AMEC010971 I 0.970
AMEM007574 Anopheles merus AMEM007574 I 0.970
AMIN000538 Anopheles minimus AMIN000538 I 0.970
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I 0.776
AQUA006534 Anopheles quadriannulatus AQUA006534 I 0.970
AQUA007553 Anopheles quadriannulatus AQUA007553 I 0.778
ASIS017452 Anopheles sinensis ASIS017452 I 0.970
ASTEI03772 Anopheles stephensi ASTEI03772 I 0.778
ASTEI07503 Anopheles stephensi ASTEI07503 I 0.970
ASU_00538 Ascaris suum ASU_00538 I 0.975
ASU_07782 Ascaris suum ASU_07782 I 0.758
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 N 0.953
A_01819 Schistosoma haematobium A_01819 I 0.745
BGIBMGA000670 Bombyx mori BGIBMGA000670 I 0.956
BGLB000662 Biomphalaria glabrata BGLB000662 I 0.781
BGLB009763 Biomphalaria glabrata BGLB009763 I 0.977
Bm12516 Brugia malayi Bm12516 I 0.758
Bm2078 Brugia malayi Bm2078 I 0.758
BTMF_0000437701 Brugia timori BTMF_0000437701 I 0.758
BXY_0757200 Bursaphelenchus xylophilus BXY_0757200 I 0.964
CapteG224811 Capitella teleta CapteG224811 I 0.759
CapteG53417 Capitella teleta CapteG53417 I 0.980
CBG16821 Caenorhabditis briggsae CBG16821 I 0.968
CBN10913 Caenorhabditis brenneri CBN10913 I 0.974
Cflo_04264--XP_624265.2_APIME Camponotus floridanus Cflo_04264--XP_624265.2_APIME I 0.809
Cflo_11610--XP_624042.1_APIME Camponotus floridanus Cflo_11610--XP_624042.1_APIME I 0.957
CGI_10027671 Crassostrea gigas CGI_10027671 I 0.983
CLEC008419 Cimex lectularius CLEC008419 I 0.956
CLEC025112 Cimex lectularius CLEC025112 I 0.767
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.845
CPIJ017884 Culex quinquefasciatus CPIJ017884 I 0.970
CpipJ_CPIJ017884 Culex pipiens CpipJ_CPIJ017884 I 0.970
D915_09414 Fasciola hepatica D915_09414 I 0.745
D917_07429 Trichinella nativa D917_07429 I 0.974
D918_08129 Trichuris suis D918_08129 I 0.946
DAPPUDRAFT_116667 Daphnia pulex DAPPUDRAFT_116667 I 0.979
DAPPUDRAFT_299736 Daphnia pulex DAPPUDRAFT_299736 I 0.790
DME_0000202701 Dracunculus medinensis DME_0000202701 I 0.765
DME_0000705401 Dracunculus medinensis DME_0000705401 I 0.973
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I 0.758
EFV59394 Trichinella spiralis EFV59394 I 0.974
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.845
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.845
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.845
NR2E1 Bos taurus ENSBTAG00000013991 I 0.845
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.845
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.845
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.845
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.845
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.845
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.845
nr2e1 Danio rerio ENSDARG00000017107 I 0.833
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.845
NR2E1 Equus caballus ENSECAG00000018990 I 0.845
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.845
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.845
NR2E1 Felis catus ENSFCAG00000002255 I 0.845
NR2E1 Homo sapiens ENSG00000112333 D 0.845
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.835
NR2E1 Gallus gallus ENSGALG00000015305 I 0.845
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.845
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.845
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.835
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.835
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.845
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.845
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.845
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.845
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.845
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.845
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.845
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.845
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.845
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.845
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.845
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.835
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.835
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.845
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.845
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.835
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.845
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.845
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.845
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.845
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.845
NR2E1 Sorex araneus ENSSARG00000013555 I 0.845
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.845
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.845
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.845
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.845
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.845
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.835
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.835
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.845
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.835
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I 0.747
e_gw.333.48.1 Branchiostoma floridae e_gw.333.48.1 I 0.980
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.821
dsf Drosophila melanogaster FBgn0015381 D 0.768
GA21482 Drosophila pseudoobscura FBgn0081468 I 0.768
GF15588 Drosophila ananassae FBgn0092613 I 0.768
GG25103 Drosophila erecta FBgn0117232 I 0.768
GH11011 Drosophila grimshawi FBgn0118492 I 0.768
GI17531 Drosophila mojavensis FBgn0140275 I 0.768
GL19043 Drosophila persimilis FBgn0156644 I 0.768
GM18579 Drosophila sechellia FBgn0173485 I 0.768
GD23369 Drosophila simulans FBgn0194755 I 0.768
GJ15408 Drosophila virilis FBgn0202602 I 0.768
GK14705 Drosophila willistoni FBgn0216711 I 0.768
GE25723 Drosophila yakuba FBgn0242781 I 0.768
GB50458 Apis mellifera GB50458 I 0.791
GB52015 Apis mellifera GB52015 I 0.946
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.801
GPLIN_000097300 Globodera pallida GPLIN_000097300 I 0.980
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.821
Hba_13386 Heterorhabditis bacteriophora Hba_13386 I 0.967
HCOI00499200 Haemonchus contortus HCOI00499200 I 0.776
HCOI00563400 Haemonchus contortus HCOI00563400 I 0.776
HelroG148449 Helobdella robusta HelroG148449 I 0.951
HelroG190681 Helobdella robusta HelroG190681 I 0.956
HelroG81672 Helobdella robusta HelroG81672 I 0.777
HHAL003045-PA Halyomorpha halys HHAL003045-PA I 0.774
HMEL013397 Heliconius melpomene HMEL013397 I 0.946
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I 0.776
Hsal_03554--XP_624042.1_APIME Harpegnathos saltator Hsal_03554--XP_624042.1_APIME I 0.957
Hsal_12124--XP_624265.2_APIME Harpegnathos saltator Hsal_12124--XP_624265.2_APIME I 0.809
ISCW009256 Ixodes scapularis ISCW009256 I 0.958
KGM_01261 Danaus plexippus KGM_01261 I 0.790
KGM_02557 Danaus plexippus KGM_02557 I 0.957
KGM_12726 Danaus plexippus KGM_12726 I 0.790
L798_02901 Zootermopsis nevadensis L798_02901 I 0.956
LCUP005636 Lucilia cuprina LCUP005636 I 0.768
LDEC002297 Leptinotarsa decemlineata LDEC002297 I 0.966
LDEC003555 Leptinotarsa decemlineata LDEC003555 I 0.796
LLOJ008560 Lutzomyia longipalpis LLOJ008560 I 0.787
LotgiG120392 Lottia gigantea LotgiG120392 I 0.981
LotgiG135497 Lottia gigantea LotgiG135497 I 0.773
maker-nMf.1.1.scaf06872-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06872-augustus-gene-0.3 N 0.868
MCINX005281 Melitaea cinxia MCINX005281 I 0.790
MDOA002279 Musca domestica MDOA002279 I 0.774
MESCA004444 Megaselia scalaris MESCA004444 I 0.775
MhA1_Contig1097.frz3.gene5 Meloidogyne hapla MhA1_Contig1097.frz3.gene5 N 0.930
Minc02801 Meloidogyne incognita Minc02801 N 0.915
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I 0.758
nAv.1.0.1.g01655 Acanthocheilonema viteae nAv.1.0.1.g01655 I 0.968
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I 0.776
nDi.2.2.2.g01137 Dirofilaria immitis nDi.2.2.2.g01137 I 0.968
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I 0.758
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.807
NEMVEDRAFT_v1g132075 Nematostella vectensis NEMVEDRAFT_v1g132075 I 0.972
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I 0.878
NEMVEDRAFT_v1g99425 Nematostella vectensis NEMVEDRAFT_v1g99425 I 0.969
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I 0.758
nOo.2.0.1.g04609 Onchocerca ochengi nOo.2.0.1.g04609 I 0.773
NV17364 Nasonia vitripennis NV17364 I 0.962
Ocbimv22038770m.g Octopus bimaculoides Ocbimv22038770m.g I 0.987
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I 0.758
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.845
PHUM494010 Pediculus humanus PHUM494010 I 0.965
PHUM596250 Pediculus humanus PHUM596250 I 0.773
PPA06908 Pristionchus pacificus PPA06908 I 0.962
PPAI008488 Phlebotomus papatasi PPAI008488 I 0.787
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.845
PXEA_0002767701 Protopolystoma xenopodis PXEA_0002767701 I 0.957
RPRC009755 Rhodnius prolixus RPRC009755 I 0.955
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I 0.746
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I 0.822
Sakowv30030751m.g Saccoglossus kowalevskii Sakowv30030751m.g I 0.982
Sakowv30031927m.g Saccoglossus kowalevskii Sakowv30031927m.g I 0.831
scaffold431-EXSNAP2012.16 Pristionchus exspectatus scaffold431-EXSNAP2012.16 I 0.953
SINV14755 Solenopsis invicta SINV14755 I 0.946
Sjc_0058250 Schistosoma japonicum Sjc_0058250 I 0.745
SMAR005242 Strigamia maritima SMAR005242 I 0.953
Smp_139360 Schistosoma mansoni Smp_139360 I 0.745
SMRZ_0001531701 Schistosoma margrebowiei SMRZ_0001531701 I 0.745
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.755
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.819
SPU_017375 Strongylocentrotus purpuratus SPU_017375 I 0.963
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I 0.816
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.819
TC001069 Tribolium castaneum TC001069 I 0.796
TC030676 Tribolium castaneum TC030676 I 0.966
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I 0.758
TCNE_0000809801 Toxocara canis TCNE_0000809801 I 0.758
TCNE_0001744001 Toxocara canis TCNE_0001744001 I 0.975
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I 0.776
tetur01g02690 Tetranychus urticae tetur01g02690 I 0.835
tetur03g02550 Tetranychus urticae tetur03g02550 I 0.955
TMUE_s0002021300 Trichuris muris TMUE_s0002021300 I 0.952
TRE_0001126701 Trichobilharzia regenti TRE_0001126701 I 0.745
TTRE_0000264801 Trichuris trichiura TTRE_0000264801 I 0.946
nhr-236 Caenorhabditis elegans WBGene00021417 I 0.971
WBGene00241769 Onchocerca volvulus WBGene00241769 I 0.758
WUBG_07942 Wuchereria bancrofti WUBG_07942 N 0.830
WUBG_10076 Wuchereria bancrofti WUBG_10076 I 0.758
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.847
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.847
XP_002154441.1 Hydra magnipapillata XP_002154441.1 N 0.913
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I 0.907
YQE_08225 Dendroctonus ponderosae YQE_08225 I 0.966
YQE_10677 Dendroctonus ponderosae YQE_10677 I 0.796