DAPPUDRAFT_116667 (Daphnia pulex)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 DAPPUDRAFT_116667 T302324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E1
M02394_2.00 		Homo sapiens
NGAGGTCARN
NYTGACCTCN		 PBM
Weirauch et al.(2014)
pTH6281 		0.755 0.643
Nr2e1
M00814_2.00 		Mus musculus
NNNGTYRNNN
NNNYRACNNN		 PBM
Weirauch et al.(2013)
pTH2936 		0.755 0.643
A1YGC6_PANPA
M02421_2.00 		Pan paniscus
NNGTCANNN
NNNTGACNN		 PBM
Weirauch et al.(2014)
pTH5561 		0.755 0.643
NR2E1
M03364_2.00 		Homo sapiens
WDAAGTCAA
TTGACTTHW		 SELEX
Jolma et al.(2013)
NR2E1_1 		0.755 0.643
NR2E1
M03365_2.00 		Homo sapiens
RARTCAWDAAGTCA
TGACTTHWTGAYTY		 SELEX
Jolma et al.(2013)
NR2E1_2 		0.755 0.643
Nr2e1
M03427_2.00 		Mus musculus
WDAAGTCAW
WTGACTTHW		 SELEX
Jolma et al.(2013)
Nr2e1_1 		0.755 0.643
Nr2e1
M03428_2.00 		Mus musculus
RRGTCAWDAAGTCA
TGACTTHWTGACYY		 SELEX
Jolma et al.(2013)
Nr2e1_2 		0.755 0.643
NR2E1
M05585_2.00 		Homo sapiens
NNAAGTCAN
NTGACTTNN		 SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX 		0.755 0.643
NR2E1
M05586_2.00 		Homo sapiens
NDAAGTCAN
NTGACTTHN		 SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX 		0.755 0.643
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX66127 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Daphnia pulex TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CGI_10027671 Crassostrea gigas CGI_10027671 I 0.985
LotgiG120392 Lottia gigantea LotgiG120392 I 0.985
NV17364 Nasonia vitripennis NV17364 I 0.982
Ocbimv22038770m.g Octopus bimaculoides Ocbimv22038770m.g I 0.980
SMU15038277 Schmidtea mediterranea SMU15038277 I 0.979
Cflo_11610--XP_624042.1_APIME Camponotus floridanus Cflo_11610--XP_624042.1_APIME I 0.977
Hsal_03554--XP_624042.1_APIME Harpegnathos saltator Hsal_03554--XP_624042.1_APIME I 0.977
KGM_02557 Danaus plexippus KGM_02557 I 0.976
PHUM494010 Pediculus humanus PHUM494010 I 0.976
TC030676 Tribolium castaneum TC030676 I 0.976
YQE_08225 Dendroctonus ponderosae YQE_08225 I 0.976
LDEC002297 Leptinotarsa decemlineata LDEC002297 I 0.976
L798_02901 Zootermopsis nevadensis L798_02901 I 0.975
BGIBMGA000670 Bombyx mori BGIBMGA000670 I 0.974
CLEC008419 Cimex lectularius CLEC008419 I 0.974
EFV59394 Trichinella spiralis EFV59394 I 0.973
D917_07429 Trichinella nativa D917_07429 I 0.973
RPRC009755 Rhodnius prolixus RPRC009755 I 0.971
GPLIN_000097300 Globodera pallida GPLIN_000097300 I 0.971
SMAR005242 Strigamia maritima SMAR005242 I 0.968
Sakowv30030751m.g Saccoglossus kowalevskii Sakowv30030751m.g I 0.968
GB52015 Apis mellifera GB52015 I 0.967
SINV14755 Solenopsis invicta SINV14755 I 0.967
HMEL013397 Heliconius melpomene HMEL013397 I 0.966
CapteG53417 Capitella teleta CapteG53417 I 0.965
CpipJ_CPIJ017884 Culex pipiens CpipJ_CPIJ017884 I 0.963
PNRLIKE Aedes aegypti AAEL008043 I 0.963
AGAP001348 Anopheles gambiae AGAP001348 I 0.963
CPIJ017884 Culex quinquefasciatus CPIJ017884 I 0.963
AALB002684 Anopheles albimanus AALB002684 I 0.963
AARA001809 Anopheles arabiensis AARA001809 I 0.963
AATE006105 Anopheles atroparvus AATE006105 I 0.963
ACOM033973 Anopheles coluzzii ACOM033973 I 0.963
ACUA020513 Anopheles culicifacies ACUA020513 I 0.963
ADIR010552 Anopheles dirus ADIR010552 I 0.963
AEPI001141 Anopheles epiroticus AEPI001141 I 0.963
AFAF018414 Anopheles farauti AFAF018414 I 0.963
AFUN001116 Anopheles funestus AFUN001116 I 0.963
AMAM020935 Anopheles maculatus AMAM020935 I 0.963
AMEC010971 Anopheles melas AMEC010971 I 0.963
AMEM007574 Anopheles merus AMEM007574 I 0.963
AMIN000538 Anopheles minimus AMIN000538 I 0.963
AQUA006534 Anopheles quadriannulatus AQUA006534 I 0.963
ASIS017452 Anopheles sinensis ASIS017452 I 0.963
ASTEI07503 Anopheles stephensi ASTEI07503 I 0.963
DME_0000705401 Dracunculus medinensis DME_0000705401 I 0.962
e_gw.333.48.1 Branchiostoma floridae e_gw.333.48.1 I 0.961
ALUE_0000688601 Ascaris lumbricoides ALUE_0000688601 I 0.960
ASU_00538 Ascaris suum ASU_00538 I 0.960
TCNE_0001744001 Toxocara canis TCNE_0001744001 I 0.960
BGLB009763 Biomphalaria glabrata BGLB009763 I 0.957
TMUE_s0002021300 Trichuris muris TMUE_s0002021300 I 0.957
CBN10913 Caenorhabditis brenneri CBN10913 I 0.954
D918_08129 Trichuris suis D918_08129 I 0.952
nAv.1.0.1.g01655 Acanthocheilonema viteae nAv.1.0.1.g01655 I 0.952
TTRE_0000264801 Trichuris trichiura TTRE_0000264801 I 0.952
NEMVEDRAFT_v1g99425 Nematostella vectensis NEMVEDRAFT_v1g99425 I 0.951
nhr-236 Caenorhabditis elegans WBGene00021417 I 0.951
nDi.2.2.2.g01137 Dirofilaria immitis nDi.2.2.2.g01137 I 0.949
NEMVEDRAFT_v1g132075 Nematostella vectensis NEMVEDRAFT_v1g132075 I 0.947
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 N 0.947
SPU_017375 Strongylocentrotus purpuratus SPU_017375 I 0.945
CBG16821 Caenorhabditis briggsae CBG16821 I 0.944
PXEA_0002767701 Protopolystoma xenopodis PXEA_0002767701 I 0.943
ISCW009256 Ixodes scapularis ISCW009256 I 0.941
Hba_13386 Heterorhabditis bacteriophora Hba_13386 I 0.941
scaffold431-EXSNAP2012.16 Pristionchus exspectatus scaffold431-EXSNAP2012.16 I 0.937
BXY_0757200 Bursaphelenchus xylophilus BXY_0757200 I 0.931
tetur03g02550 Tetranychus urticae tetur03g02550 I 0.930
PPA06908 Pristionchus pacificus PPA06908 I 0.928
HelroG148449 Helobdella robusta HelroG148449 I 0.925
XP_002154441.1 Hydra magnipapillata XP_002154441.1 N 0.925
MhA1_Contig1097.frz3.gene5 Meloidogyne hapla MhA1_Contig1097.frz3.gene5 N 0.920
HelroG190681 Helobdella robusta HelroG190681 I 0.917
Minc02801 Meloidogyne incognita Minc02801 N 0.903
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I 0.859
maker-nMf.1.1.scaf06872-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06872-augustus-gene-0.3 N 0.851
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I 0.843
WUBG_07942 Wuchereria bancrofti WUBG_07942 N 0.805
HelroG81672 Helobdella robusta HelroG81672 I 0.783
L889_g22720 Steinernema feltiae L889_g22720 I 0.775
NR2F6 Tetraodon nigroviridis ENSTNIG00000010182 I 0.772
NR2F6 Takifugu rubripes ENSTRUG00000004353 I 0.772
L596_g17227 Steinernema carpocapsae L596_g17227 I 0.772
Smp_174750 Schistosoma mansoni Smp_174750 I 0.769
L893_g17786 Steinernema glaseri L893_g17786 I 0.769
SROB_0002212701 Schistosoma rodhaini SROB_0002212701 I 0.769
ACAC_0000851101 Angiostrongylus cantonensis ACAC_0000851101 I 0.767
ANCCAN_06314 Ancylostoma caninum ANCCAN_06314 I 0.767
ANCCEY_08759 Ancylostoma ceylanicum ANCCEY_08759 I 0.767
DICVIV_09685 Dictyocaulus viviparus DICVIV_09685 I 0.767
HCOI01788400 Haemonchus contortus HCOI01788400 I 0.767
HPLM_0000431601 Haemonchus placei HPLM_0000431601 I 0.767
NBR_0001334401 Nippostrongylus brasiliensis NBR_0001334401 I 0.767
NBR_0001642901 Nippostrongylus brasiliensis NBR_0001642901 I 0.767
NECAME_09496 Necator americanus NECAME_09496 I 0.767
TELCIR_00680 Teladorsagia circumcincta TELCIR_00680 I 0.767
L898_g30372 Steinernema monticolum L898_g30372 I 0.766
CGOC_0000088801 Cylicostephanus goldi CGOC_0000088801 I 0.765
HPBE_0001507701 Heligmosomoides bakeri HPBE_0001507701 I 0.764
nRc.2.0.1.g46780 Romanomermis culicivorax nRc.2.0.1.g46780 I 0.764
Bm4429 Brugia malayi Bm4429 I 0.763
LOAG_00337 Loa loa LOAG_00337 I 0.763
WBGene00237444 Onchocerca volvulus WBGene00237444 I 0.763
BTMF_0001121901 Brugia timori BTMF_0001121901 I 0.763
DICVIV_09548 Dictyocaulus viviparus DICVIV_09548 I 0.763
DME_0000359001 Dracunculus medinensis DME_0000359001 I 0.763
nAv.1.0.1.g03443 Acanthocheilonema viteae nAv.1.0.1.g03443 I 0.763
nLs.2.1.2.g07992 Litomosoides sigmodontis nLs.2.1.2.g07992 I 0.763
nOo.2.0.1.g08426 Onchocerca ochengi nOo.2.0.1.g08426 I 0.763
nRc.2.0.1.g02277 Romanomermis culicivorax nRc.2.0.1.g02277 I 0.763
OFLC_0000536201 Onchocerca flexuosa OFLC_0000536201 I 0.763
TCLT_0000045701 Thelazia callipaeda TCLT_0000045701 I 0.763
TCNE_0001579701 Toxocara canis TCNE_0001579701 I 0.763
A_00851 Schistosoma haematobium A_00851 I 0.761
SCUD_0000777901 Schistosoma curassoni SCUD_0000777901 I 0.761
SMTD_0001915201 Schistosoma mattheei SMTD_0001915201 I 0.761
ALUE_0000465801 Ascaris lumbricoides ALUE_0000465801 I 0.759
ASU_08381 Ascaris suum ASU_08381 I 0.759
nDi.2.2.2.g01326 Dirofilaria immitis nDi.2.2.2.g01326 I 0.759
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.758
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.758
TELCIR_00096 Teladorsagia circumcincta TELCIR_00096 I 0.758
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.755
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.755
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.755
NR2E1 Bos taurus ENSBTAG00000013991 I 0.755
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.755
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.755
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.755
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.755
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.755
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.755
NR2E1 Equus caballus ENSECAG00000018990 I 0.755
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.755
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.755
NR2E1 Felis catus ENSFCAG00000002255 I 0.755
NR2E1 Homo sapiens ENSG00000112333 D 0.755
NR2E1 Gallus gallus ENSGALG00000015305 I 0.755
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.755
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.755
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.755
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.755
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.755
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.755
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.755
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.755
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.755
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.755
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.755
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.755
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.755
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.755
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.755
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.755
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.755
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.755
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.755
NR2E1 Sorex araneus ENSSARG00000013555 I 0.755
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.755
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.755
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.755
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.755
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.755
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.755
Aan_R007044 Calypte anna Aan_R007044 I 0.755
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.755
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.755
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.755
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.755
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.755
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.755
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.755
L596_g23334 Steinernema carpocapsae L596_g23334 I 0.755
L889_g28055 Steinernema feltiae L889_g28055 I 0.755
L892_g17164 Steinernema scapterisci L892_g17164 I 0.755
L893_g33993 Steinernema glaseri L893_g33993 I 0.755
L898_g4691 Steinernema monticolum L898_g4691 I 0.755
PTRK_0000971200 Parastrongyloides trichosuri PTRK_0000971200 I 0.755
SPAL_0001408100 Strongyloides papillosus SPAL_0001408100 I 0.755
SVE_1723700 Strongyloides venezuelensis SVE_1723700 I 0.755
AAH78057 Xenopus laevis AAH78057 I 0.754
Ppa-unc-55 Pristionchus pacificus PPA04999 I 0.751
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.750
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.750
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I 0.749
ENSAMXG00000019916 Astyanax mexicanus ENSAMXG00000019916 I 0.747