CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Minc18991
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc18991
T307445_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc18991
Nuclear receptor
19
88
TRCCICGYIASGFIYYNVMCCDGCKHFFRRSLNAEELFKCKFDGNCDVMRVSNKCKSCRFDKCILMGMNI
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
N
0.955
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
N
0.951
maker-nMf.1.1.scaf00198-snap-gene-0.24
Meloidogyne floridensis
maker-nMf.1.1.scaf00198-snap-gene-0.24
N
0.986
maker-nMf.1.1.scaf01969-augustus-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf01969-augustus-gene-0.11
N
0.885
maker-nMf.1.1.scaf03265-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03265-augustus-gene-0.7
N
0.895
maker-nMf.1.1.scaf06196-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06196-snap-gene-0.8
N
0.916
maker-nMf.1.1.scaf06884-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf06884-augustus-gene-0.5
N
0.756
maker-nMf.1.1.scaf08255-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08255-snap-gene-0.4
N
0.960
maker-nMf.1.1.scaf11763-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf11763-augustus-gene-0.3
N
0.950
maker-nMf.1.1.scaf14574-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf14574-augustus-gene-0.4
N
0.890
maker-nMf.1.1.scaf15444-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf15444-snap-gene-0.4
N
0.952
MhA1_Contig1386.frz3.gene10
Meloidogyne hapla
MhA1_Contig1386.frz3.gene10
N
0.980
MhA1_Contig2339.frz3.gene1
Meloidogyne hapla
MhA1_Contig2339.frz3.gene1
N
0.892
MhA1_Contig2339.frz3.gene2
Meloidogyne hapla
MhA1_Contig2339.frz3.gene2
N
0.920
MhA1_Contig392.frz3.gene14
Meloidogyne hapla
MhA1_Contig392.frz3.gene14
N
0.753
MhA1_Contig41.frz3.gene12
Meloidogyne hapla
MhA1_Contig41.frz3.gene12
N
0.909
MhA1_Contig790.frz3.gene2
Meloidogyne hapla
MhA1_Contig790.frz3.gene2
N
0.948
MhA1_Contig790.frz3.gene5
Meloidogyne hapla
MhA1_Contig790.frz3.gene5
N
0.948
MhA1_Contig988.frz3.gene1
Meloidogyne hapla
MhA1_Contig988.frz3.gene1
N
0.939
Minc02054
Meloidogyne incognita
Minc02054
N
0.803
Minc02055
Meloidogyne incognita
Minc02055
N
0.756
Minc03976
Meloidogyne incognita
Minc03976
N
0.986
Minc04725
Meloidogyne incognita
Minc04725
N
0.916
Minc07962
Meloidogyne incognita
Minc07962
N
0.803
Minc07964
Meloidogyne incognita
Minc07964
N
0.803
Minc09140
Meloidogyne incognita
Minc09140
N
0.803
Minc09142
Meloidogyne incognita
Minc09142
N
0.756
Minc09143
Meloidogyne incognita
Minc09143
N
0.756
Minc13321
Meloidogyne incognita
Minc13321
N
0.893
Minc13448
Meloidogyne incognita
Minc13448
N
0.950
Minc14854
Meloidogyne incognita
Minc14854
N
0.890
Minc15187
Meloidogyne incognita
Minc15187
N
0.760
Minc15189
Meloidogyne incognita
Minc15189
N
0.803
Minc17464
Meloidogyne incognita
Minc17464
N
0.893
Minc17667
Meloidogyne incognita
Minc17667
N
0.980
Minc18661
Meloidogyne incognita
Minc18661
N
0.964