GPLIN_000607300 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000607300 T308674_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000607300 Nuclear receptor 53 122

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_02206 Ancylostoma ceylanicum ANCCEY_02206 N 0.918
ANCDUO_19443 Ancylostoma duodenale ANCDUO_19443 N 0.918
BXY_0332200 Bursaphelenchus xylophilus BXY_0332200 N 0.874
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.757
CBG05270 Caenorhabditis briggsae CBG05270 N 0.885
CBG07379 Caenorhabditis briggsae CBG07379 N 0.933
CBN02605 Caenorhabditis brenneri CBN02605 N 0.935
CBN30611 Caenorhabditis brenneri CBN30611 N 0.885
CJA04524 Caenorhabditis japonica CJA04524 N 0.936
CJA10118 Caenorhabditis japonica CJA10118 N 0.889
CRE19235 Caenorhabditis remanei CRE19235 N 0.885
CRE22320 Caenorhabditis remanei CRE22320 N 0.935
GPLIN_000663400 Globodera pallida GPLIN_000663400 N 0.993
GPUH_0002529501 Gongylonema pulchrum GPUH_0002529501 N 0.853
L596_g18686 Steinernema carpocapsae L596_g18686 N 0.861
L596_g18692 Steinernema carpocapsae L596_g18692 N 0.905
L892_g2121 Steinernema scapterisci L892_g2121 N 0.905
L892_g23809 Steinernema scapterisci L892_g23809 N 0.854
L893_g13248 Steinernema glaseri L893_g13248 N 0.825
L893_g20500 Steinernema glaseri L893_g20500 N 0.905
LOAG_12834 Loa loa LOAG_12834 N 0.790
nDi.2.2.2.g04775 Dirofilaria immitis nDi.2.2.2.g04775 N 0.788
NECAME_02646 Necator americanus NECAME_02646 N 0.918
nOo.2.0.1.g08044 Onchocerca ochengi nOo.2.0.1.g08044 N 0.797
RSKR_0000313900 Rhabditophanes kr3021 RSKR_0000313900 N 0.884
scaffold429-EXSNAP2012.6 Pristionchus exspectatus scaffold429-EXSNAP2012.6 N 0.922
scaffold50-EXSNAP2012.1 Pristionchus exspectatus scaffold50-EXSNAP2012.1 N 0.832
SMUV_0001020501 Syphacia muris SMUV_0001020501 N 0.827
nhr-32 Caenorhabditis elegans WBGene00003626 N 0.885
nhr-71 Caenorhabditis elegans WBGene00003661 N 0.932
WBGene00239074 Onchocerca volvulus WBGene00239074 N 0.797
WUBG_12380 Wuchereria bancrofti WUBG_12380 N 0.806