CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g2121
(
Steinernema scapterisci
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L892_g2121
T309237_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g2121.t1
Nuclear receptor
389
458
TPCAICHAEADGLHYGAISCRSCNAFFRRAVTFNQVYFCRKSNDCDVTEDVRCSCRACRFNKCIKAGMSI
Links
Other
Nuclear receptor
family TFs
Other
Steinernema scapterisci
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g18692
Steinernema carpocapsae
L596_g18692
N
0.992
L893_g20500
Steinernema glaseri
L893_g20500
N
0.991
RSKR_0000313900
Rhabditophanes kr3021
RSKR_0000313900
N
0.941
L892_g23809
Steinernema scapterisci
L892_g23809
N
0.931
L596_g18686
Steinernema carpocapsae
L596_g18686
N
0.923
L893_g13248
Steinernema glaseri
L893_g13248
N
0.910
GPLIN_000607300
Globodera pallida
GPLIN_000607300
N
0.905
GPLIN_000663400
Globodera pallida
GPLIN_000663400
N
0.905
BXY_0332200
Bursaphelenchus xylophilus
BXY_0332200
N
0.880
ANCCEY_02206
Ancylostoma ceylanicum
ANCCEY_02206
N
0.878
ANCDUO_19443
Ancylostoma duodenale
ANCDUO_19443
N
0.878
NECAME_02646
Necator americanus
NECAME_02646
N
0.878
RSKR_0000406200
Rhabditophanes kr3021
RSKR_0000406200
N
0.877
scaffold429-EXSNAP2012.6
Pristionchus exspectatus
scaffold429-EXSNAP2012.6
N
0.876
nhr-71
Caenorhabditis elegans
WBGene00003661
N
0.871
CJA04524
Caenorhabditis japonica
CJA04524
N
0.870
L889_g32924
Steinernema feltiae
L889_g32924
N
0.870
CBN02605
Caenorhabditis brenneri
CBN02605
N
0.868
CRE22320
Caenorhabditis remanei
CRE22320
N
0.868
CBG07379
Caenorhabditis briggsae
CBG07379
N
0.864
SMUV_0001020501
Syphacia muris
SMUV_0001020501
N
0.860
LOAG_12834
Loa loa
LOAG_12834
N
0.852
CBG05270
Caenorhabditis briggsae
CBG05270
N
0.848
CBN30611
Caenorhabditis brenneri
CBN30611
N
0.848
CRE19235
Caenorhabditis remanei
CRE19235
N
0.848
nhr-32
Caenorhabditis elegans
WBGene00003626
N
0.848
CJA10118
Caenorhabditis japonica
CJA10118
N
0.845
GPUH_0002529501
Gongylonema pulchrum
GPUH_0002529501
N
0.844
scaffold50-EXSNAP2012.1
Pristionchus exspectatus
scaffold50-EXSNAP2012.1
N
0.818
WUBG_12380
Wuchereria bancrofti
WUBG_12380
N
0.793
nDi.2.2.2.g04775
Dirofilaria immitis
nDi.2.2.2.g04775
N
0.793
WBGene00239074
Onchocerca volvulus
WBGene00239074
N
0.785
nOo.2.0.1.g08044
Onchocerca ochengi
nOo.2.0.1.g08044
N
0.785
Minc11538
Meloidogyne incognita
Minc11538
N
0.773
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06448-processed-gene-0.0
N
0.773
MhA1_Contig194.frz3.gene8
Meloidogyne hapla
MhA1_Contig194.frz3.gene8
N
0.773