HPBE_0001028701 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0001028701 T308862_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
daf-12
M00685_2.00 		Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN		 PBM
Narasimhan et al.(2015)
pTH9108 		0.867 0.762
daf-12
M08159_2.00 		Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC		 ChIP-seq
Mathelier et al.(2014)
MA0538.1 		0.867 0.762
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001028701-mRNA-1 Nuclear receptor 25 87

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015931 Ailuropoda melanoleuca ENSAMEG00000015931 I
FIGLA Bos taurus ENSBTAG00000008905 I
ENSCJAG00000019358 Callithrix jacchus ENSCJAG00000019358 I
FIGLA Cavia porcellus ENSCPOG00000027561 I
ENSCSAG00000015178 Chlorocebus sabaeus ENSCSAG00000015178 I
ENSDNOG00000019277 Dasypus novemcinctus ENSDNOG00000019277 I
Figla Dipodomys ordii ENSDORG00000000358 I
FIGLA Equus caballus ENSECAG00000024203 I
ENSEEUG00000003733 Erinaceus europaeus ENSEEUG00000003733 N
FIGLA Echinops telfairi ENSETEG00000011908 I
FIGLA Homo sapiens ENSG00000183733 D
FIGLA Gorilla gorilla ENSGGOG00000003953 I
FIGLA Loxodonta africana ENSLAFG00000010827 I
FIGLA Myotis lucifugus ENSMLUG00000017374 I
FIGLA Macaca mulatta ENSMMUG00000020852 I
ENSMPUG00000007271 Mustela putorius furo ENSMPUG00000007271 I
Figla Mus musculus ENSMUSG00000030001 D
ENSNLEG00000010223 Nomascus leucogenys ENSNLEG00000010223 I
FIGLA Oryctolagus cuniculus ENSOCUG00000017295 I
FIGLA Otolemur garnettii ENSOGAG00000030530 I
ENSP00000333097 Macaca fascicularis ENSP00000333097 N
ENSPANG00000010751 Papio anubis ENSPANG00000010751 I
ENSPPYG00000012320 Pongo abelii ENSPPYG00000012320 I
ENSPPYG00000012737 Pongo abelii ENSPPYG00000012737 I
FIGLA Pan troglodytes ENSPTRG00000012033 I
Figla Rattus norvegicus ENSRNOG00000015877 I
FIGLA Sus scrofa ENSSSCG00000008321 I
ENSSTOG00000007556 Ictidomys tridecemlineatus ENSSTOG00000007556 I
ENSTSYG00000002605 Tarsius syrichta ENSTSYG00000002605 N
FIGLA Tursiops truncatus ENSTTRG00000011308 I
ENSVPAG00000002321 Vicugna pacos ENSVPAG00000002321 N