L892_g14818 (Steinernema scapterisci)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L892_g14818 T309182_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.782 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g14818.t1 Nuclear receptor 51 121

Links

Other Nuclear receptor family TFs
Other Steinernema scapterisci TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29764.m000758 Ricinus communis 29764.m000758 N
Bo3g109540 Brassica oleracea Bo3g109540 I
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N
Cla002432 Citrullus lanatus Cla002432 N
Cucsa.273280 Cucumis sativus Cucsa.273280 N
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N
Lus10015587.g Linum usitatissimum Lus10015587.g I
Lus10032919.g Linum usitatissimum Lus10032919.g I
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N
SapurV1A.0662s0040 Salix purpurea SapurV1A.0662s0040 N
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N
SapurV1A.2735s0030 Salix purpurea SapurV1A.2735s0030 N