L898_g22454 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g22454 T309464_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.990 0.857
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.938 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g22454.t1 Nuclear receptor 13 82

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA007064 Oryza indica BGIOSGA007064 I 0.000
BGIOSGA008790 Oryza indica BGIOSGA008790 I 0.000
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.000
BGIOSGA016936 Oryza indica BGIOSGA016936 I 0.000
BGIOSGA023442 Oryza indica BGIOSGA023442 N 0.000
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.000
BRADI1G32370 Brachypodium distachyon BRADI1G32370 N 0.000
Ca_00645 Cicer arietinum Ca_00645 I 0.000
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I 0.000
Cucsa.058770 Cucumis sativus Cucsa.058770 I 0.000
F775_02595 Aegilops tauschii F775_02595 N 0.000
F775_03870 Aegilops tauschii F775_03870 I 0.000
F775_04264 Aegilops tauschii F775_04264 I 0.000
F775_04777 Aegilops tauschii F775_04777 I 0.000
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.000
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.000
GRMZM2G069525 Zea mays GRMZM2G069525 I 0.000
GRMZM2G090230 Zea mays GRMZM2G090230 I 0.000
GRMZM2G100709 Zea mays GRMZM2G100709 N 0.000
GRMZM2G106185 Zea mays GRMZM2G106185 I 0.000
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.000
GRMZM2G454449 Zea mays GRMZM2G454449 N 0.000
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.000
GSMUA_Achr7G03510_001 Musa acuminata GSMUA_Achr7G03510_001 I 0.000
GSMUA_Achr9G30700_001 Musa acuminata GSMUA_Achr9G30700_001 I 0.000
LPERR02G22340 Leersia perrieri LPERR02G22340 I 0.000
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.000
LPERR04G17940 Leersia perrieri LPERR04G17940 I 0.000
LPERR06G20200 Leersia perrieri LPERR06G20200 N 0.000
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.000
mgf023762m Mimulus guttatus mgf023762m I 0.000
MLOC_53840 Hordeum vulgare MLOC_53840 N 0.000
MLOC_53958 Hordeum vulgare MLOC_53958 N 0.000
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.000
MLOC_67085 Hordeum vulgare MLOC_67085 N 0.000
OB02G34860 Oryza brachyantha OB02G34860 I 0.000
OB03G12320 Oryza brachyantha OB03G12320 I 0.000
OB04G28940 Oryza brachyantha OB04G28940 I 0.000
OB06G32040 Oryza brachyantha OB06G32040 N 0.000
OB10G24340 Oryza brachyantha OB10G24340 I 0.000
OBART02G05200 Oryza barthii OBART02G05200 I 0.000
OBART02G27470 Oryza barthii OBART02G27470 I 0.000
OBART03G02370 Oryza barthii OBART03G02370 I 0.000
OBART04G21930 Oryza barthii OBART04G21930 I 0.000
OBART06G24290 Oryza barthii OBART06G24290 N 0.000
OBART10G17270 Oryza barthii OBART10G17270 I 0.000
OGLUM02G05030 Oryza glumaepatula OGLUM02G05030 I 0.000
OGLUM02G28020 Oryza glumaepatula OGLUM02G28020 I 0.000
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.000
OGLUM04G21960 Oryza glumaepatula OGLUM04G21960 I 0.000
OGLUM06G25550 Oryza glumaepatula OGLUM06G25550 N 0.000
OLONG_000346 Oryza longistaminata OLONG_000346 I 0.000
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.000
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.000
OLONG_016687 Oryza longistaminata OLONG_016687 I 0.000
OLONG_019167 Oryza longistaminata OLONG_019167 I 0.000
OLONG_026929 Oryza longistaminata OLONG_026929 N 0.000
OMERI02G26760 Oryza meridionalis OMERI02G26760 I 0.000
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.000
OMERI04G18450 Oryza meridionalis OMERI04G18450 I 0.000
OMERI06G24530 Oryza meridionalis OMERI06G24530 N 0.000
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.000
ONIVA02G05430 Oryza nivara ONIVA02G05430 I 0.000
ONIVA02G30300 Oryza nivara ONIVA02G30300 I 0.000
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.000
ONIVA04G20480 Oryza nivara ONIVA04G20480 I 0.000
ONIVA06G30620 Oryza nivara ONIVA06G30620 N 0.000
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.000
OPUNC02G04370 Oryza punctata OPUNC02G04370 I 0.000
OPUNC02G25130 Oryza punctata OPUNC02G25130 I 0.000
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.000
OPUNC04G19690 Oryza punctata OPUNC04G19690 I 0.000
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.000
ORGLA02G0047700 Oryza glaberrima ORGLA02G0047700 I 0.000
ORGLA02G0236600 Oryza glaberrima ORGLA02G0236600 I 0.000
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.000
ORGLA04G0189700 Oryza glaberrima ORGLA04G0189700 I 0.000
ORGLA06G0204400 Oryza glaberrima ORGLA06G0204400 N 0.000
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.000
ORUFI02G05300 Oryza rufipogon ORUFI02G05300 I 0.000
ORUFI02G28930 Oryza rufipogon ORUFI02G28930 I 0.000
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.000
ORUFI04G23540 Oryza rufipogon ORUFI04G23540 I 0.000
ORUFI06G26110 Oryza rufipogon ORUFI06G26110 N 0.000
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.000
OS02G0168200 Oryza sativa OS02G0168200 I 0.000
OS04G0566600 Oryza sativa OS04G0566600 I 0.000
OS06G0670300 Oryza sativa OS06G0670300 N 0.000
Pavir.Aa00827 Panicum virgatum Pavir.Aa00827 I 0.000
Pavir.Ab02674 Panicum virgatum Pavir.Ab02674 I 0.000
Pavir.Da00200 Panicum virgatum Pavir.Da00200 N 0.000
Pavir.Db00422 Panicum virgatum Pavir.Db00422 N 0.000
Pavir.Gb01051 Panicum virgatum Pavir.Gb01051 I 0.000
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.000
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.000
Pavir.J09702 Panicum virgatum Pavir.J09702 I 0.000
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.000
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.000
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.000
Sb04g032130 Sorghum bicolor Sb04g032130 I 0.000
Sb06g025600 Sorghum bicolor Sb06g025600 I 0.000
Sb10g026930 Sorghum bicolor Sb10g026930 N 0.000
Si007179m.g Setaria italica Si007179m.g N 0.000
Si011884m.g Setaria italica Si011884m.g I 0.000
Si019625m.g Setaria italica Si019625m.g I 0.000
Si036127m.g Setaria italica Si036127m.g I 0.000
Si039234m.g Setaria italica Si039234m.g I 0.000
Solyc02g080730.1 Solanum lycopersicum Solyc02g080730.1 I 0.000
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.000
TCM_001942 Theobroma cacao TCM_001942 I 0.000
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.000
Traes_7AL_9A1395EC7 Triticum aestivum Traes_7AL_9A1395EC7 I 0.000
Traes_7AL_BF6FD97DA Triticum aestivum Traes_7AL_BF6FD97DA N 0.000
Traes_7DL_FEA7D3672 Triticum aestivum Traes_7DL_FEA7D3672 N 0.000
TRIUR3_18158 Triticum urartu TRIUR3_18158 I 0.000
TRIUR3_18893 Triticum urartu TRIUR3_18893 N 0.000
TRIUR3_34172 Triticum urartu TRIUR3_34172 I 0.000
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.000