MhA1_Contig1792.frz3.gene6 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig1792.frz3.gene6 T309636_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.978 0.871
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.978 0.857
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.968 0.829
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.968 0.829
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.968 0.829
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.968 0.814
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.963 0.814
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.957 0.814
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.950 0.814
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1792.frz3.gene6 Nuclear receptor 293 363

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000745301 Ascaris lumbricoides ALUE_0000745301 I
ANCCAN_18740 Ancylostoma caninum ANCCAN_18740 N
ASIM_0001156501 Anisakis simplex ASIM_0001156501 I
ASU_01867 Ascaris suum ASU_01867 I
Bm1750 Brugia malayi Bm1750 I
EEL_0000993601 Elaeophora elaphi EEL_0000993601 I
LOAG_16988 Loa loa LOAG_16988 I
nAv.1.0.1.g02052 Acanthocheilonema viteae nAv.1.0.1.g02052 I
nDi.2.2.2.g00288 Dirofilaria immitis nDi.2.2.2.g00288 I
nLs.2.1.2.g06915 Litomosoides sigmodontis nLs.2.1.2.g06915 I
nOo.2.0.1.g00910 Onchocerca ochengi nOo.2.0.1.g00910 I
OFLC_0000064301 Onchocerca flexuosa OFLC_0000064301 I
TCLT_0000019401 Thelazia callipaeda TCLT_0000019401 I
WBGene00247572 Onchocerca volvulus WBGene00247572 I
WUBG_05117 Wuchereria bancrofti WUBG_05117 I