CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig2502.frz3.gene1
(
Meloidogyne hapla
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
MhA1_Contig2502.frz3.gene1
T309646_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig2502.frz3.gene1
Nuclear receptor
18
88
PRCAVCSDKAQGLHFGVMVCRACAAFFRRSTIAKRVYQCRYNGNCQINFREVRCSCRACRFARCISLGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne hapla
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BXY_0777500
Bursaphelenchus xylophilus
BXY_0777500
N
0.771
BXY_1091300
Bursaphelenchus xylophilus
BXY_1091300
N
0.748
EVEC_0001266201
Enterobius vermicularis
EVEC_0001266201
I
0.868
GPLIN_001629700
Globodera pallida
GPLIN_001629700
N
0.931
L596_g27594
Steinernema carpocapsae
L596_g27594
N
0.759
L889_g21170
Steinernema feltiae
L889_g21170
N
0.759
L892_g15823
Steinernema scapterisci
L892_g15823
N
0.759
L892_g8140
Steinernema scapterisci
L892_g8140
I
0.769
L892_g8145
Steinernema scapterisci
L892_g8145
I
0.768
L893_g4569
Steinernema glaseri
L893_g4569
I
0.768
L898_g30838
Steinernema monticolum
L898_g30838
N
0.759
PPA08785
Pristionchus pacificus
PPA08785
I
0.801
PPA10478
Pristionchus pacificus
PPA10478
I
0.797
scaffold183-EXSNAP2012.18
Pristionchus exspectatus
scaffold183-EXSNAP2012.18
I
0.801
scaffold260-EXSNAP2012.15
Pristionchus exspectatus
scaffold260-EXSNAP2012.15
I
0.797
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.802
SMUV_0000886001
Syphacia muris
SMUV_0000886001
I
0.802