PPA10478 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA10478 T305877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.855 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA10478 Nuclear receptor 7 77

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.990
PPA08785 Pristionchus pacificus PPA08785 I 0.989
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.989
NECAME_01500 Necator americanus NECAME_01500 I 0.964
CBN03769 Caenorhabditis brenneri CBN03769 I 0.908
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.907
L892_g10708 Steinernema scapterisci L892_g10708 I 0.903
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.903
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.894
CBN04619 Caenorhabditis brenneri CBN04619 I 0.885
CRE18529 Caenorhabditis remanei CRE18529 I 0.879
CBG12152 Caenorhabditis briggsae CBG12152 I 0.873
CJA10576 Caenorhabditis japonica CJA10576 I 0.869
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.866
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.865
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.860
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.857
CBG16375 Caenorhabditis briggsae CBG16375 I 0.856
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.855
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.855
CRE27659 Caenorhabditis remanei CRE27659 I 0.852
L889_g9698 Steinernema feltiae L889_g9698 I 0.852
L889_g987 Steinernema feltiae L889_g987 I 0.852
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.851
L893_g9517 Steinernema glaseri L893_g9517 I 0.848
L892_g8145 Steinernema scapterisci L892_g8145 I 0.844
L893_g4569 Steinernema glaseri L893_g4569 I 0.844
L893_g2090 Steinernema glaseri L893_g2090 I 0.839
L892_g8140 Steinernema scapterisci L892_g8140 I 0.836
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.834
SPAL_0001578700 Strongyloides papillosus SPAL_0001578700 N 0.832
SVE_0983600 Strongyloides venezuelensis SVE_0983600 N 0.832
scaffold119-EXSNAP2012.21 Pristionchus exspectatus scaffold119-EXSNAP2012.21 N 0.828
SSTP_0000309200 Strongyloides stercoralis SSTP_0000309200 N 0.821
L898_g28806 Steinernema monticolum L898_g28806 I 0.815
CJA04414 Caenorhabditis japonica CJA04414 I 0.813
CJA07390 Caenorhabditis japonica CJA07390 I 0.813
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.813
PTRK_0000018200 Parastrongyloides trichosuri PTRK_0000018200 N 0.811
L892_g8144 Steinernema scapterisci L892_g8144 I 0.810
L889_g16048 Steinernema feltiae L889_g16048 N 0.801
CBN24070 Caenorhabditis brenneri CBN24070 I 0.797
MhA1_Contig2502.frz3.gene1 Meloidogyne hapla MhA1_Contig2502.frz3.gene1 N 0.797
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.797
L889_g10781 Steinernema feltiae L889_g10781 I 0.792
L898_g10723 Steinernema monticolum L898_g10723 I 0.791
CBN16902 Caenorhabditis brenneri CBN16902 I 0.790
PPA29361 Pristionchus pacificus PPA29361 I 0.784
L892_g8146 Steinernema scapterisci L892_g8146 N 0.784
L889_g17146 Steinernema feltiae L889_g17146 I 0.778
L898_g9580 Steinernema monticolum L898_g9580 I 0.776
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.775
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.775
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.772
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.772
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.771
CBG03687 Caenorhabditis briggsae CBG03687 I 0.767
CRE27174 Caenorhabditis remanei CRE27174 I 0.764
L898_g18539 Steinernema monticolum L898_g18539 I 0.761
CJA17128 Caenorhabditis japonica CJA17128 N 0.758
BXY_1188800 Bursaphelenchus xylophilus BXY_1188800 N 0.753
L893_g3450 Steinernema glaseri L893_g3450 N 0.745