CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PTRK_0000018200
(
Parastrongyloides trichosuri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PTRK_0000018200
T309987_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0000018200.1
Nuclear receptor
34
103
QLCAVCDDKADGIHYGILSCRSCCAFFRRSCVHGQKYVCRFGGNCNVSMGDRCVCRYCRFNKCLKKGMQV
Links
Other
Nuclear receptor
family TFs
Other
Parastrongyloides trichosuri
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSTP_0000309200
Strongyloides stercoralis
SSTP_0000309200
N
0.993
SPAL_0001578700
Strongyloides papillosus
SPAL_0001578700
N
0.987
SVE_0983600
Strongyloides venezuelensis
SVE_0983600
N
0.987
PPA08785
Pristionchus pacificus
PPA08785
I
0.814
scaffold183-EXSNAP2012.18
Pristionchus exspectatus
scaffold183-EXSNAP2012.18
I
0.814
PPA10478
Pristionchus pacificus
PPA10478
I
0.811
scaffold260-EXSNAP2012.15
Pristionchus exspectatus
scaffold260-EXSNAP2012.15
I
0.811
EVEC_0001266201
Enterobius vermicularis
EVEC_0001266201
I
0.780