L898_g10723 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g10723 T309414_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.858 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g10723.t1 Nuclear receptor 32 101

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g8140 Steinernema scapterisci L892_g8140 I 0.986
L893_g9517 Steinernema glaseri L893_g9517 I 0.986
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.953
L892_g8145 Steinernema scapterisci L892_g8145 I 0.947
L893_g4569 Steinernema glaseri L893_g4569 I 0.947
L889_g9698 Steinernema feltiae L889_g9698 I 0.938
L889_g987 Steinernema feltiae L889_g987 I 0.938
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.918
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.905
CBG12152 Caenorhabditis briggsae CBG12152 I 0.885
CRE18529 Caenorhabditis remanei CRE18529 I 0.885
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.877
CBN03769 Caenorhabditis brenneri CBN03769 I 0.860
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.858
CRE27659 Caenorhabditis remanei CRE27659 I 0.855
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.854
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.848
CBG16375 Caenorhabditis briggsae CBG16375 I 0.844
CJA10576 Caenorhabditis japonica CJA10576 I 0.844
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.844
CBN04619 Caenorhabditis brenneri CBN04619 I 0.843
L898_g28806 Steinernema monticolum L898_g28806 I 0.839
L892_g8144 Steinernema scapterisci L892_g8144 I 0.833
CJA04414 Caenorhabditis japonica CJA04414 I 0.810
CJA07390 Caenorhabditis japonica CJA07390 I 0.810
BXY_0777500 Bursaphelenchus xylophilus BXY_0777500 N 0.809
NECAME_01500 Necator americanus NECAME_01500 I 0.806
L893_g2090 Steinernema glaseri L893_g2090 I 0.804
CBN24070 Caenorhabditis brenneri CBN24070 I 0.802
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.796
L892_g10708 Steinernema scapterisci L892_g10708 I 0.794
PPA08785 Pristionchus pacificus PPA08785 I 0.792
scaffold183-EXSNAP2012.18 Pristionchus exspectatus scaffold183-EXSNAP2012.18 I 0.792
PPA10478 Pristionchus pacificus PPA10478 I 0.791
scaffold260-EXSNAP2012.15 Pristionchus exspectatus scaffold260-EXSNAP2012.15 I 0.791
L889_g10781 Steinernema feltiae L889_g10781 I 0.775
CRE17354 Caenorhabditis remanei CRE17354 I 0.771
CRE17310 Caenorhabditis remanei CRE17310 I 0.759
EVEC_0001095701 Enterobius vermicularis EVEC_0001095701 I 0.749