CRE17354 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE17354 T302212_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.953 0.766
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.760 0.641
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE17354 Nuclear receptor 1 64

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE17355 Caenorhabditis remanei CRE17355 I 0.984
CBN24070 Caenorhabditis brenneri CBN24070 I 0.981
CRE17310 Caenorhabditis remanei CRE17310 I 0.975
CBG03687 Caenorhabditis briggsae CBG03687 I 0.973
CBG12152 Caenorhabditis briggsae CBG12152 I 0.967
CRE18529 Caenorhabditis remanei CRE18529 I 0.967
nhr-86 Caenorhabditis elegans WBGene00003676 D 0.953
CBN03769 Caenorhabditis brenneri CBN03769 I 0.949
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.949
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.946
CBN03440 Caenorhabditis brenneri CBN03440 I 0.920
CBG03688 Caenorhabditis briggsae CBG03688 I 0.918
CJA04414 Caenorhabditis japonica CJA04414 I 0.878
CJA07390 Caenorhabditis japonica CJA07390 I 0.878
CBG16375 Caenorhabditis briggsae CBG16375 I 0.877
CJA10576 Caenorhabditis japonica CJA10576 I 0.874
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.869
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.866
CBN04619 Caenorhabditis brenneri CBN04619 I 0.855
CRE27659 Caenorhabditis remanei CRE27659 I 0.853
L892_g8140 Steinernema scapterisci L892_g8140 I 0.841
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.841
SMUV_0000801801 Syphacia muris SMUV_0000801801 I 0.837
L893_g4569 Steinernema glaseri L893_g4569 I 0.827
L892_g8145 Steinernema scapterisci L892_g8145 I 0.826
SMUV_0000886001 Syphacia muris SMUV_0000886001 I 0.821
EVEC_0001266201 Enterobius vermicularis EVEC_0001266201 I 0.814
PPA29361 Pristionchus pacificus PPA29361 I 0.807
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.806
L889_g9698 Steinernema feltiae L889_g9698 I 0.800
L889_g987 Steinernema feltiae L889_g987 I 0.800
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.797
CBG01395 Caenorhabditis briggsae CBG01395 N 0.787
L893_g9517 Steinernema glaseri L893_g9517 I 0.785
CBN16902 Caenorhabditis brenneri CBN16902 I 0.784
L898_g28806 Steinernema monticolum L898_g28806 I 0.781
L892_g8144 Steinernema scapterisci L892_g8144 I 0.779
L892_g10708 Steinernema scapterisci L892_g10708 I 0.771
L898_g10723 Steinernema monticolum L898_g10723 I 0.771
L596_g9106 Steinernema carpocapsae L596_g9106 I 0.770
CBG20699 Caenorhabditis briggsae CBG20699 I 0.765
CRE17311 Caenorhabditis remanei CRE17311 N 0.765
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.760
CRE07801 Caenorhabditis remanei CRE07801 I 0.759
CRE27174 Caenorhabditis remanei CRE27174 I 0.757
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.746