CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE17355
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE17355
T302213_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.924
0.743
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE17355
Nuclear receptor
8
77
SKCAICLEEGDGFHFGAEACKACTAFFRRSVSQKRIYTCRGANDCDITINIRCMCRACRYSKCLEVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE17354
Caenorhabditis remanei
CRE17354
I
0.984
CBN24070
Caenorhabditis brenneri
CBN24070
I
0.970
CRE17310
Caenorhabditis remanei
CRE17310
I
0.959
CBG03687
Caenorhabditis briggsae
CBG03687
I
0.957
CBG03688
Caenorhabditis briggsae
CBG03688
I
0.954
CBG12152
Caenorhabditis briggsae
CBG12152
I
0.946
CRE18529
Caenorhabditis remanei
CRE18529
I
0.946
CJA04414
Caenorhabditis japonica
CJA04414
I
0.932
CJA07390
Caenorhabditis japonica
CJA07390
I
0.932
nhr-86
Caenorhabditis elegans
WBGene00003676
D
0.924
CBN03769
Caenorhabditis brenneri
CBN03769
I
0.919
nhr-109
Caenorhabditis elegans
WBGene00003699
I
0.917
nhr-273
Caenorhabditis elegans
WBGene00020460
I
0.913
nhr-12
Caenorhabditis elegans
WBGene00003611
I
0.886
CBN03440
Caenorhabditis brenneri
CBN03440
I
0.876
CBG01395
Caenorhabditis briggsae
CBG01395
N
0.874
CBN16902
Caenorhabditis brenneri
CBN16902
I
0.871
CRE27174
Caenorhabditis remanei
CRE27174
I
0.853
CBG16375
Caenorhabditis briggsae
CBG16375
I
0.812
CJA10576
Caenorhabditis japonica
CJA10576
I
0.807
nhr-16
Caenorhabditis elegans
WBGene00003615
I
0.799
nhr-28
Caenorhabditis elegans
WBGene00003624
I
0.796
CBN04619
Caenorhabditis brenneri
CBN04619
I
0.781
CRE27659
Caenorhabditis remanei
CRE27659
I
0.778
L892_g8140
Steinernema scapterisci
L892_g8140
I
0.762
scaffold1235-EXSNAP2012.2
Pristionchus exspectatus
scaffold1235-EXSNAP2012.2
I
0.762
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.756