CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NECAME_01500
(
Necator americanus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NECAME_01500
T309784_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.822
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_01500
Nuclear receptor
6
76
RCCRVCCDRSDGAHFGIDSCRACAAFFRRSIAMKKKYICRQGSNTCDISKSVRCICRKCRLEKCLLAGMLP
Links
Other
Nuclear receptor
family TFs
Other
Necator americanus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPA08785
Pristionchus pacificus
PPA08785
I
0.965
scaffold183-EXSNAP2012.18
Pristionchus exspectatus
scaffold183-EXSNAP2012.18
I
0.965
PPA10478
Pristionchus pacificus
PPA10478
I
0.964
scaffold260-EXSNAP2012.15
Pristionchus exspectatus
scaffold260-EXSNAP2012.15
I
0.964
CBN03769
Caenorhabditis brenneri
CBN03769
I
0.905
EVEC_0001095701
Enterobius vermicularis
EVEC_0001095701
I
0.896
L892_g10708
Steinernema scapterisci
L892_g10708
I
0.894
PPA29361
Pristionchus pacificus
PPA29361
I
0.874
L596_g9106
Steinernema carpocapsae
L596_g9106
I
0.873
SMUV_0000909301
Syphacia muris
SMUV_0000909301
I
0.868
scaffold1235-EXSNAP2012.2
Pristionchus exspectatus
scaffold1235-EXSNAP2012.2
I
0.866
L893_g9517
Steinernema glaseri
L893_g9517
I
0.860
CRE18529
Caenorhabditis remanei
CRE18529
I
0.857
SMUV_0000801801
Syphacia muris
SMUV_0000801801
I
0.854
CBG12152
Caenorhabditis briggsae
CBG12152
I
0.850
L892_g8140
Steinernema scapterisci
L892_g8140
I
0.846
SMUV_0000886001
Syphacia muris
SMUV_0000886001
I
0.844
nhr-109
Caenorhabditis elegans
WBGene00003699
I
0.837
CBN04619
Caenorhabditis brenneri
CBN04619
I
0.836
CJA10576
Caenorhabditis japonica
CJA10576
I
0.835
CBG16375
Caenorhabditis briggsae
CBG16375
I
0.832
nhr-28
Caenorhabditis elegans
WBGene00003624
I
0.830
L889_g9698
Steinernema feltiae
L889_g9698
I
0.827
L889_g987
Steinernema feltiae
L889_g987
I
0.827
L892_g8145
Steinernema scapterisci
L892_g8145
I
0.823
L893_g4569
Steinernema glaseri
L893_g4569
I
0.823
nhr-86
Caenorhabditis elegans
WBGene00003676
D
0.822
CRE27659
Caenorhabditis remanei
CRE27659
I
0.814
EVEC_0001266201
Enterobius vermicularis
EVEC_0001266201
I
0.810
L889_g17146
Steinernema feltiae
L889_g17146
I
0.810
L898_g10723
Steinernema monticolum
L898_g10723
I
0.806
nhr-273
Caenorhabditis elegans
WBGene00020460
I
0.799
CRE27174
Caenorhabditis remanei
CRE27174
I
0.789
scaffold1278-EXSNAP2012.5
Pristionchus exspectatus
scaffold1278-EXSNAP2012.5
N
0.787
scaffold861-EXSNAP2012.4
Pristionchus exspectatus
scaffold861-EXSNAP2012.4
N
0.786
nhr-12
Caenorhabditis elegans
WBGene00003611
I
0.777
L892_g8146
Steinernema scapterisci
L892_g8146
N
0.770
CBN16902
Caenorhabditis brenneri
CBN16902
I
0.768
SPAL_0001578700
Strongyloides papillosus
SPAL_0001578700
N
0.768
SVE_0983600
Strongyloides venezuelensis
SVE_0983600
N
0.768
L596_g24910
Steinernema carpocapsae
L596_g24910
N
0.765
L889_g16048
Steinernema feltiae
L889_g16048
N
0.761
L596_g27786
Steinernema carpocapsae
L596_g27786
I
0.760
CJA04414
Caenorhabditis japonica
CJA04414
I
0.759
CJA07390
Caenorhabditis japonica
CJA07390
I
0.759
BXY_0777500
Bursaphelenchus xylophilus
BXY_0777500
N
0.759
L893_g2090
Steinernema glaseri
L893_g2090
I
0.759
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
0.757
nhr-43
Caenorhabditis elegans
WBGene00003633
N
0.755
L892_g8144
Steinernema scapterisci
L892_g8144
I
0.751
L898_g28806
Steinernema monticolum
L898_g28806
I
0.747