NBR_0001834801 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0001834801 T309739_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.868 0.543
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.782 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001834801-mRNA-1 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.931
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.919
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.915
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.906
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.868
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.868
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.868
L898_g4012 Steinernema monticolum L898_g4012 I 0.867
CBG09320 Caenorhabditis briggsae CBG09320 I 0.860
CBN21486 Caenorhabditis brenneri CBN21486 I 0.860
CBN28290 Caenorhabditis brenneri CBN28290 I 0.860
CJA28065 Caenorhabditis japonica CJA28065 I 0.860
CRE31070 Caenorhabditis remanei CRE31070 I 0.860
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.853
L889_g6804 Steinernema feltiae L889_g6804 I 0.844
L892_g10843 Steinernema scapterisci L892_g10843 I 0.842
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.840
L892_g14814 Steinernema scapterisci L892_g14814 N 0.833
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.833
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.831
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.830
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.830
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.830
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.827
CBG20729 Caenorhabditis briggsae CBG20729 I 0.825
BXY_1091100 Bursaphelenchus xylophilus BXY_1091100 N 0.821
L898_g3512 Steinernema monticolum L898_g3512 I 0.817
CBN23838 Caenorhabditis brenneri CBN23838 I 0.814
CRE15644 Caenorhabditis remanei CRE15644 I 0.814
L889_g6696 Steinernema feltiae L889_g6696 I 0.811
L889_g8187 Steinernema feltiae L889_g8187 I 0.805
L596_g14541 Steinernema carpocapsae L596_g14541 N 0.797
L898_g4015 Steinernema monticolum L898_g4015 N 0.790
CBG09567 Caenorhabditis briggsae CBG09567 I 0.788
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.786
L893_g27930 Steinernema glaseri L893_g27930 I 0.785
L892_g2782 Steinernema scapterisci L892_g2782 I 0.784
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.782
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.781
L898_g19019 Steinernema monticolum L898_g19019 I 0.781
CRE18699 Caenorhabditis remanei CRE18699 I 0.777
L898_g19021 Steinernema monticolum L898_g19021 I 0.775
L898_g12799 Steinernema monticolum L898_g12799 I 0.772
L889_g8185 Steinernema feltiae L889_g8185 I 0.771
L892_g14816 Steinernema scapterisci L892_g14816 N 0.767
L889_g6798 Steinernema feltiae L889_g6798 I 0.766
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.766
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.764
CRE18430 Caenorhabditis remanei CRE18430 I 0.761
L898_g2943 Steinernema monticolum L898_g2943 N 0.761
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.760
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.760
L898_g12798 Steinernema monticolum L898_g12798 I 0.760
CBG06601 Caenorhabditis briggsae CBG06601 I 0.759
CBG06611 Caenorhabditis briggsae CBG06611 I 0.759
L892_g10842 Steinernema scapterisci L892_g10842 I 0.757
NECAME_01500 Necator americanus NECAME_01500 I 0.757
Minc14668 Meloidogyne incognita Minc14668 I 0.755
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.753
L893_g18992 Steinernema glaseri L893_g18992 I 0.751
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.748
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.747