L898_g3512 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g3512 T309504_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.897 0.543
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.877 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g3512.t1 Nuclear receptor 6 76

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g2782 Steinernema scapterisci L892_g2782 I 0.979
L889_g6696 Steinernema feltiae L889_g6696 I 0.978
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.973
L889_g6804 Steinernema feltiae L889_g6804 I 0.947
L892_g10843 Steinernema scapterisci L892_g10843 I 0.937
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.936
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.929
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.927
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.918
CBG20729 Caenorhabditis briggsae CBG20729 I 0.903
CBG09567 Caenorhabditis briggsae CBG09567 I 0.903
CRE15644 Caenorhabditis remanei CRE15644 I 0.899
CBN23838 Caenorhabditis brenneri CBN23838 I 0.899
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.898
CRE15675 Caenorhabditis remanei CRE15675 I 0.898
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.897
L892_g14834 Steinernema scapterisci L892_g14834 N 0.897
L898_g12798 Steinernema monticolum L898_g12798 I 0.895
L893_g27930 Steinernema glaseri L893_g27930 I 0.894
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.887
CBG20727 Caenorhabditis briggsae CBG20727 I 0.884
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.877
CBG06601 Caenorhabditis briggsae CBG06601 I 0.873
CBN28290 Caenorhabditis brenneri CBN28290 I 0.873
CRE18430 Caenorhabditis remanei CRE18430 I 0.873
CBG06611 Caenorhabditis briggsae CBG06611 I 0.873
CBN21486 Caenorhabditis brenneri CBN21486 I 0.873
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.871
L889_g6692 Steinernema feltiae L889_g6692 I 0.867
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.867
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.865
L893_g18992 Steinernema glaseri L893_g18992 I 0.863
L892_g2780 Steinernema scapterisci L892_g2780 I 0.860
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.858
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.857
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.857
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.857
L898_g12799 Steinernema monticolum L898_g12799 I 0.857
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.857
CRE30948 Caenorhabditis remanei CRE30948 I 0.854
Minc14668 Meloidogyne incognita Minc14668 I 0.848
CBG22870 Caenorhabditis briggsae CBG22870 I 0.846
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.846
L893_g18997 Steinernema glaseri L893_g18997 I 0.844
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.844
L898_g3514 Steinernema monticolum L898_g3514 I 0.844
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.844
L898_g3515 Steinernema monticolum L898_g3515 I 0.842
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.840
L889_g6792 Steinernema feltiae L889_g6792 I 0.837
L889_g8185 Steinernema feltiae L889_g8185 I 0.835
CJA28065 Caenorhabditis japonica CJA28065 I 0.831
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.829
L889_g6694 Steinernema feltiae L889_g6694 I 0.827
L596_g14580 Steinernema carpocapsae L596_g14580 N 0.827
L898_g21763 Steinernema monticolum L898_g21763 I 0.826
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.824
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.822
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.818
L893_g18993 Steinernema glaseri L893_g18993 I 0.817
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.817
CBG09320 Caenorhabditis briggsae CBG09320 I 0.817
CRE31070 Caenorhabditis remanei CRE31070 I 0.817
L892_g2781 Steinernema scapterisci L892_g2781 I 0.816
L889_g6695 Steinernema feltiae L889_g6695 I 0.807
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.799
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.799
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.794
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.793
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.793
PPA14290 Pristionchus pacificus PPA14290 I 0.792
CBG16982 Caenorhabditis briggsae CBG16982 I 0.786
CRE08691 Caenorhabditis remanei CRE08691 I 0.778
CJA09697 Caenorhabditis japonica CJA09697 I 0.776
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.775
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.770
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.768
CBN13569 Caenorhabditis brenneri CBN13569 I 0.768
L898_g4015 Steinernema monticolum L898_g4015 N 0.763
L898_g4012 Steinernema monticolum L898_g4012 I 0.763
L892_g14825 Steinernema scapterisci L892_g14825 I 0.753