CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g14532
(
Steinernema carpocapsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L596_g14532
T308930_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR
YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.812
0.571
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g14532.t1
Nuclear receptor
2
73
PSCAVCDSKAHGVHFQVNSCRACAAFFRRSIAVGKDYKCRRASRDCELKDAGSKNICRFCRYQKCLQAGMVY
Links
Other
Nuclear receptor
family TFs
Other
Steinernema carpocapsae
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g10843
Steinernema scapterisci
L892_g10843
I
0.984
L889_g6804
Steinernema feltiae
L889_g6804
I
0.979
L893_g27930
Steinernema glaseri
L893_g27930
I
0.948
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.940
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.939
L898_g3512
Steinernema monticolum
L898_g3512
I
0.929
L889_g6792
Steinernema feltiae
L889_g6792
I
0.926
L889_g8185
Steinernema feltiae
L889_g8185
I
0.910
L898_g4018
Steinernema monticolum
L898_g4018
N
0.903
L898_g3515
Steinernema monticolum
L898_g3515
I
0.899
L889_g6694
Steinernema feltiae
L889_g6694
I
0.886
L898_g21763
Steinernema monticolum
L898_g21763
I
0.884
L596_g14590
Steinernema carpocapsae
L596_g14590
I
0.882
L889_g6696
Steinernema feltiae
L889_g6696
I
0.881
L898_g19012
Steinernema monticolum
L898_g19012
I
0.877
L889_g6695
Steinernema feltiae
L889_g6695
I
0.875
L898_g12799
Steinernema monticolum
L898_g12799
I
0.875
L596_g14541
Steinernema carpocapsae
L596_g14541
N
0.873
L893_g18992
Steinernema glaseri
L893_g18992
I
0.873
L889_g6692
Steinernema feltiae
L889_g6692
I
0.871
L893_g18993
Steinernema glaseri
L893_g18993
I
0.869
L596_g14596
Steinernema carpocapsae
L596_g14596
I
0.869
L892_g14818
Steinernema scapterisci
L892_g14818
I
0.864
L898_g4015
Steinernema monticolum
L898_g4015
N
0.864
HPLM_0000974401
Haemonchus placei
HPLM_0000974401
I
0.864
L892_g2780
Steinernema scapterisci
L892_g2780
I
0.863
L596_g14537
Steinernema carpocapsae
L596_g14537
I
0.853
L596_g14536
Steinernema carpocapsae
L596_g14536
I
0.844
L596_g14533
Steinernema carpocapsae
L596_g14533
I
0.843
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
0.840
HCOI01190000
Haemonchus contortus
HCOI01190000
I
0.838
L892_g10842
Steinernema scapterisci
L892_g10842
I
0.838
HPLM_0000974301
Haemonchus placei
HPLM_0000974301
I
0.838
L898_g2943
Steinernema monticolum
L898_g2943
N
0.836
L898_g4012
Steinernema monticolum
L898_g4012
I
0.832
L892_g14817
Steinernema scapterisci
L892_g14817
I
0.823
L889_g8187
Steinernema feltiae
L889_g8187
I
0.822
L889_g6806
Steinernema feltiae
L889_g6806
N
0.822
CRE31070
Caenorhabditis remanei
CRE31070
I
0.818
CBG09320
Caenorhabditis briggsae
CBG09320
I
0.818
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.815
CJA28065
Caenorhabditis japonica
CJA28065
I
0.813
nhr-142
Caenorhabditis elegans
WBGene00018430
D
0.812
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
0.812
L898_g3514
Steinernema monticolum
L898_g3514
I
0.811
L892_g10840
Steinernema scapterisci
L892_g10840
N
0.805
L898_g19014
Steinernema monticolum
L898_g19014
I
0.804
CBN28290
Caenorhabditis brenneri
CBN28290
I
0.802
CBN21486
Caenorhabditis brenneri
CBN21486
I
0.802
L898_g19021
Steinernema monticolum
L898_g19021
I
0.802
L892_g2781
Steinernema scapterisci
L892_g2781
I
0.801
L889_g6799
Steinernema feltiae
L889_g6799
I
0.798
L889_g6798
Steinernema feltiae
L889_g6798
I
0.794
L898_g19019
Steinernema monticolum
L898_g19019
I
0.786
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.784
L898_g2944
Steinernema monticolum
L898_g2944
N
0.781
L889_g6803
Steinernema feltiae
L889_g6803
N
0.766
L893_g27935
Steinernema glaseri
L893_g27935
N
0.766
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.763
L898_g12798
Steinernema monticolum
L898_g12798
I
0.755
L596_g14589
Steinernema carpocapsae
L596_g14589
I
0.753
L889_g6797
Steinernema feltiae
L889_g6797
I
0.752
CRE30948
Caenorhabditis remanei
CRE30948
I
0.747
L898_g32142
Steinernema monticolum
L898_g32142
N
0.745