CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g18992
(
Steinernema glaseri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L893_g18992
T309337_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.833
0.457
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g18992.t1
Nuclear receptor
112
182
GLCRVCGAKSHGAHFQVQTCRACAAFFRRTCAGGRTYKCRRATKSCDVAKNAQLNCRYCRFERCRKVGMKY
Links
Other
Nuclear receptor
family TFs
Other
Steinernema glaseri
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g2780
Steinernema scapterisci
L892_g2780
I
0.990
L596_g14596
Steinernema carpocapsae
L596_g14596
I
0.989
L889_g6692
Steinernema feltiae
L889_g6692
I
0.989
L889_g6694
Steinernema feltiae
L889_g6694
I
0.987
L898_g3515
Steinernema monticolum
L898_g3515
I
0.987
L596_g14590
Steinernema carpocapsae
L596_g14590
I
0.986
L889_g6695
Steinernema feltiae
L889_g6695
I
0.978
L898_g3514
Steinernema monticolum
L898_g3514
I
0.960
L596_g14589
Steinernema carpocapsae
L596_g14589
I
0.956
L892_g2781
Steinernema scapterisci
L892_g2781
I
0.949
L889_g6804
Steinernema feltiae
L889_g6804
I
0.923
L898_g12799
Steinernema monticolum
L898_g12799
I
0.903
L889_g8185
Steinernema feltiae
L889_g8185
I
0.895
L892_g10843
Steinernema scapterisci
L892_g10843
I
0.894
L898_g4015
Steinernema monticolum
L898_g4015
N
0.877
L898_g21763
Steinernema monticolum
L898_g21763
I
0.875
L596_g14532
Steinernema carpocapsae
L596_g14532
I
0.873
L898_g19012
Steinernema monticolum
L898_g19012
I
0.872
L596_g14580
Steinernema carpocapsae
L596_g14580
N
0.866
L898_g3512
Steinernema monticolum
L898_g3512
I
0.863
L893_g18993
Steinernema glaseri
L893_g18993
I
0.854
CRE15644
Caenorhabditis remanei
CRE15644
I
0.847
L893_g27930
Steinernema glaseri
L893_g27930
I
0.847
CBN23838
Caenorhabditis brenneri
CBN23838
I
0.847
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
0.846
L596_g14541
Steinernema carpocapsae
L596_g14541
N
0.842
L889_g6806
Steinernema feltiae
L889_g6806
N
0.840
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.839
CBG20729
Caenorhabditis briggsae
CBG20729
I
0.834
nhr-232
Caenorhabditis elegans
WBGene00012494
D
0.833
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.833
L596_g14586
Steinernema carpocapsae
L596_g14586
I
0.832
L596_g14537
Steinernema carpocapsae
L596_g14537
I
0.832
L892_g14818
Steinernema scapterisci
L892_g14818
I
0.830
L898_g12798
Steinernema monticolum
L898_g12798
I
0.829
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.828
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.828
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.820
L889_g6696
Steinernema feltiae
L889_g6696
I
0.817
L898_g4012
Steinernema monticolum
L898_g4012
I
0.816
L889_g6792
Steinernema feltiae
L889_g6792
I
0.815
L893_g27943
Steinernema glaseri
L893_g27943
N
0.812
L898_g19014
Steinernema monticolum
L898_g19014
I
0.810
L892_g14834
Steinernema scapterisci
L892_g14834
N
0.805
SVUK_0002058501
Strongylus vulgaris
SVUK_0002058501
I
0.801
L898_g4018
Steinernema monticolum
L898_g4018
N
0.799
L889_g8187
Steinernema feltiae
L889_g8187
I
0.791
CRE30948
Caenorhabditis remanei
CRE30948
I
0.789
ACOC_0000492601
Angiostrongylus costaricensis
ACOC_0000492601
I
0.788
nhr-170
Caenorhabditis elegans
WBGene00008309
I
0.787
L596_g14533
Steinernema carpocapsae
L596_g14533
I
0.783
CRE15675
Caenorhabditis remanei
CRE15675
I
0.782
CBG20727
Caenorhabditis briggsae
CBG20727
I
0.781
L596_g14536
Steinernema carpocapsae
L596_g14536
I
0.779
nhr-178
Caenorhabditis elegans
WBGene00017510
I
0.777
L892_g10842
Steinernema scapterisci
L892_g10842
I
0.776
nhr-54
Caenorhabditis elegans
WBGene00003644
I
0.773
CBG22870
Caenorhabditis briggsae
CBG22870
I
0.771
L893_g18997
Steinernema glaseri
L893_g18997
I
0.770
L898_g2943
Steinernema monticolum
L898_g2943
N
0.763
nhr-231
Caenorhabditis elegans
WBGene00012449
I
0.763
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
0.762
L892_g14817
Steinernema scapterisci
L892_g14817
I
0.762
L892_g10840
Steinernema scapterisci
L892_g10840
N
0.759
L889_g6803
Steinernema feltiae
L889_g6803
N
0.758
L893_g27935
Steinernema glaseri
L893_g27935
N
0.758
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
0.751
ANCCEY_13226
Ancylostoma ceylanicum
ANCCEY_13226
I
0.747
HCOI00483700
Haemonchus contortus
HCOI00483700
I
0.747
HPLM_0000277901
Haemonchus placei
HPLM_0000277901
I
0.747