L898_g12798 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g12798 T309423_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.841 0.529
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.841 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g12798.t1 Nuclear receptor 11 81

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.979
L889_g6696 Steinernema feltiae L889_g6696 I 0.941
Minc14668 Meloidogyne incognita Minc14668 I 0.924
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.922
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.917
L892_g14834 Steinernema scapterisci L892_g14834 N 0.914
L898_g3512 Steinernema monticolum L898_g3512 I 0.895
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.892
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.885
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.883
CJA09697 Caenorhabditis japonica CJA09697 I 0.882
L892_g2782 Steinernema scapterisci L892_g2782 I 0.879
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.875
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.866
CBG06601 Caenorhabditis briggsae CBG06601 I 0.865
CBG06611 Caenorhabditis briggsae CBG06611 I 0.865
CRE18430 Caenorhabditis remanei CRE18430 I 0.865
CBG22870 Caenorhabditis briggsae CBG22870 I 0.862
L889_g6692 Steinernema feltiae L889_g6692 I 0.861
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.856
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.856
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.856
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.854
CBN21486 Caenorhabditis brenneri CBN21486 I 0.851
CBN28290 Caenorhabditis brenneri CBN28290 I 0.851
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.850
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.849
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.848
CBG09567 Caenorhabditis briggsae CBG09567 I 0.847
CBG20727 Caenorhabditis briggsae CBG20727 I 0.842
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.841
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.841
L889_g6695 Steinernema feltiae L889_g6695 I 0.839
CRE30948 Caenorhabditis remanei CRE30948 I 0.838
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.837
L898_g3514 Steinernema monticolum L898_g3514 I 0.835
CRE08691 Caenorhabditis remanei CRE08691 I 0.834
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.832
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.832
L893_g18992 Steinernema glaseri L893_g18992 I 0.829
CJA28065 Caenorhabditis japonica CJA28065 I 0.823
CBG09320 Caenorhabditis briggsae CBG09320 I 0.822
CRE31070 Caenorhabditis remanei CRE31070 I 0.822
PPA14290 Pristionchus pacificus PPA14290 I 0.820
CBG20729 Caenorhabditis briggsae CBG20729 I 0.819
L892_g2781 Steinernema scapterisci L892_g2781 I 0.817
CBN23838 Caenorhabditis brenneri CBN23838 I 0.815
CRE15644 Caenorhabditis remanei CRE15644 I 0.815
L892_g2780 Steinernema scapterisci L892_g2780 I 0.813
L898_g3515 Steinernema monticolum L898_g3515 I 0.809
L889_g6694 Steinernema feltiae L889_g6694 I 0.808
L893_g18995 Steinernema glaseri L893_g18995 N 0.806
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.799
CRE15675 Caenorhabditis remanei CRE15675 I 0.796
CBN13569 Caenorhabditis brenneri CBN13569 I 0.793
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.793
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.780
CBG14515 Caenorhabditis briggsae CBG14515 I 0.778
CBN12210 Caenorhabditis brenneri CBN12210 I 0.778
CJA02156 Caenorhabditis japonica CJA02156 I 0.778
CRE00301 Caenorhabditis remanei CRE00301 I 0.778
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.778
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.774
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.772
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.772
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.771
CBG06599 Caenorhabditis briggsae CBG06599 I 0.768
CBG06609 Caenorhabditis briggsae CBG06609 I 0.768
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.760
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.755
L892_g14824 Steinernema scapterisci L892_g14824 N 0.754
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.751
L898_g12799 Steinernema monticolum L898_g12799 I 0.749
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.746
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.745