CRE30948 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE30948 T302318_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.993 0.886
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.888 0.629
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.829 0.571
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.825 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.825 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE30948 Nuclear receptor 45 115

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.993
CBG09567 Caenorhabditis briggsae CBG09567 I 0.991
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.966
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.959
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.959
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.959
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.958
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.955
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.952
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.952
L892_g2782 Steinernema scapterisci L892_g2782 I 0.946
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.942
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.940
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.935
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.914
CBG06609 Caenorhabditis briggsae CBG06609 I 0.903
CBG06599 Caenorhabditis briggsae CBG06599 I 0.903
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.899
CBG20729 Caenorhabditis briggsae CBG20729 I 0.896
CBG06611 Caenorhabditis briggsae CBG06611 I 0.895
CBG06601 Caenorhabditis briggsae CBG06601 I 0.895
CRE18430 Caenorhabditis remanei CRE18430 I 0.895
CBG09320 Caenorhabditis briggsae CBG09320 I 0.893
CBN28290 Caenorhabditis brenneri CBN28290 I 0.893
CRE31070 Caenorhabditis remanei CRE31070 I 0.893
CBN21486 Caenorhabditis brenneri CBN21486 I 0.893
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.892
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.892
L898_g21763 Steinernema monticolum L898_g21763 I 0.891
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.891
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.888
CRE15644 Caenorhabditis remanei CRE15644 I 0.882
CBN23838 Caenorhabditis brenneri CBN23838 I 0.882
CBG20727 Caenorhabditis briggsae CBG20727 I 0.879
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.876
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.874
CJA28065 Caenorhabditis japonica CJA28065 I 0.872
L893_g18993 Steinernema glaseri L893_g18993 I 0.870
CJA09697 Caenorhabditis japonica CJA09697 I 0.867
Minc14668 Meloidogyne incognita Minc14668 I 0.866
CRE15675 Caenorhabditis remanei CRE15675 I 0.863
CRE08691 Caenorhabditis remanei CRE08691 I 0.863
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.862
L889_g6797 Steinernema feltiae L889_g6797 I 0.862
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.861
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.860
CBG22870 Caenorhabditis briggsae CBG22870 I 0.858
L898_g19019 Steinernema monticolum L898_g19019 I 0.856
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.856
CBG16982 Caenorhabditis briggsae CBG16982 I 0.855
L898_g3512 Steinernema monticolum L898_g3512 I 0.854
L898_g3514 Steinernema monticolum L898_g3514 I 0.851
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.849
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.846
CRE14847 Caenorhabditis remanei CRE14847 I 0.844
PPA14290 Pristionchus pacificus PPA14290 I 0.841
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.841
L898_g12798 Steinernema monticolum L898_g12798 I 0.838
L892_g2781 Steinernema scapterisci L892_g2781 I 0.837
L892_g14817 Steinernema scapterisci L892_g14817 I 0.835
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.835
CBG06387 Caenorhabditis briggsae CBG06387 I 0.835
L898_g3515 Steinernema monticolum L898_g3515 I 0.835
CRE08749 Caenorhabditis remanei CRE08749 I 0.830
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.829
CBN01168 Caenorhabditis brenneri CBN01168 I 0.828
CRE08690 Caenorhabditis remanei CRE08690 I 0.828
L889_g6798 Steinernema feltiae L889_g6798 I 0.827
L889_g6695 Steinernema feltiae L889_g6695 I 0.827
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.826
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.825
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.825
CBN13569 Caenorhabditis brenneri CBN13569 I 0.823
CBN13200 Caenorhabditis brenneri CBN13200 I 0.823
L889_g6799 Steinernema feltiae L889_g6799 I 0.819
CBG19141 Caenorhabditis briggsae CBG19141 I 0.819
L893_g18997 Steinernema glaseri L893_g18997 I 0.818
CJA03481 Caenorhabditis japonica CJA03481 I 0.818
CRE10693 Caenorhabditis remanei CRE10693 I 0.817
CRE15097 Caenorhabditis remanei CRE15097 I 0.817
L898_g4013 Steinernema monticolum L898_g4013 I 0.815
L889_g6696 Steinernema feltiae L889_g6696 I 0.815
L889_g6694 Steinernema feltiae L889_g6694 I 0.815
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.812
CJA19466 Caenorhabditis japonica CJA19466 I 0.809
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.801
L889_g6692 Steinernema feltiae L889_g6692 I 0.800
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.797
L889_g8185 Steinernema feltiae L889_g8185 I 0.793
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.793
L893_g18992 Steinernema glaseri L893_g18992 I 0.789
L892_g2780 Steinernema scapterisci L892_g2780 I 0.785
CBG15881 Caenorhabditis briggsae CBG15881 I 0.780
CRE05044 Caenorhabditis remanei CRE05044 I 0.778
CBG04928 Caenorhabditis briggsae CBG04928 I 0.777
CBG14515 Caenorhabditis briggsae CBG14515 I 0.769
CBN12210 Caenorhabditis brenneri CBN12210 I 0.769
CJA02156 Caenorhabditis japonica CJA02156 I 0.769
CRE00301 Caenorhabditis remanei CRE00301 I 0.769
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.769
CBG04929 Caenorhabditis briggsae CBG04929 I 0.767
L892_g14818 Steinernema scapterisci L892_g14818 I 0.760
CBN04849 Caenorhabditis brenneri CBN04849 I 0.759
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.758
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.756
CJA03572 Caenorhabditis japonica CJA03572 I 0.755
CRE08753 Caenorhabditis remanei CRE08753 I 0.754
CBN13022 Caenorhabditis brenneri CBN13022 I 0.752
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.750
CRE14848 Caenorhabditis remanei CRE14848 I 0.750
L889_g6792 Steinernema feltiae L889_g6792 I 0.747
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.747