CJA03481 (Caenorhabditis japonica)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CJA03481 T301935_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.987 0.943
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.795 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA03481 Nuclear receptor 30 101

Links

Other Nuclear receptor family TFs
Other Caenorhabditis japonica TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE08690 Caenorhabditis remanei CRE08690 I 0.987
CBN01168 Caenorhabditis brenneri CBN01168 I 0.987
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.987
CRE08760 Caenorhabditis remanei CRE08760 I 0.850
CRE30948 Caenorhabditis remanei CRE30948 I 0.818
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.810
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.795
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.773
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.772
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.767
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.767
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.767
MhA1_Contig1462.frz3.gene15 Meloidogyne hapla MhA1_Contig1462.frz3.gene15 I 0.763
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.760
CBG09567 Caenorhabditis briggsae CBG09567 I 0.755