PEQ_0000560101 (Parascaris equorum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PEQ_0000560101 T309970_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.886 0.565
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.817 0.581
nhr-84
M02414_2.00 		Caenorhabditis elegans
NRGTCACAAN
NTTGTGACYN		 PBM
Weirauch et al.(2014)
pTH5828 		0.814 0.548
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.795 0.516
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.795 0.516
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PEQ_0000560101-mRNA-1 Nuclear receptor 2 64

Links

Other Nuclear receptor family TFs
Other Parascaris equorum TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.931
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.909
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.909
CBG04928 Caenorhabditis briggsae CBG04928 I 0.900
CRE30948 Caenorhabditis remanei CRE30948 I 0.899
ASU_09680 Ascaris suum ASU_09680 N 0.894
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.886
CBG09567 Caenorhabditis briggsae CBG09567 I 0.878
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.876
CBG16982 Caenorhabditis briggsae CBG16982 I 0.870
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.866
CRE05044 Caenorhabditis remanei CRE05044 I 0.863
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.861
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.858
TCNE_0001716801 Toxocara canis TCNE_0001716801 N 0.853
CBN13200 Caenorhabditis brenneri CBN13200 I 0.850
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.848
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.848
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.848
CBG04929 Caenorhabditis briggsae CBG04929 I 0.845
CRE10693 Caenorhabditis remanei CRE10693 I 0.845
CRE15097 Caenorhabditis remanei CRE15097 I 0.845
CBG15881 Caenorhabditis briggsae CBG15881 I 0.843
nhr-183 Caenorhabditis elegans WBGene00018266 I 0.831
L893_g18993 Steinernema glaseri L893_g18993 I 0.828
CBG06599 Caenorhabditis briggsae CBG06599 I 0.823
CBG06609 Caenorhabditis briggsae CBG06609 I 0.823
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.821
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.817
L889_g6799 Steinernema feltiae L889_g6799 I 0.817
CRE12950 Caenorhabditis remanei CRE12950 I 0.816
L893_g18997 Steinernema glaseri L893_g18997 I 0.816
CBG09320 Caenorhabditis briggsae CBG09320 I 0.814
CBN01168 Caenorhabditis brenneri CBN01168 I 0.814
CBN21486 Caenorhabditis brenneri CBN21486 I 0.814
CBN28290 Caenorhabditis brenneri CBN28290 I 0.814
CRE08690 Caenorhabditis remanei CRE08690 I 0.814
CRE31070 Caenorhabditis remanei CRE31070 I 0.814
nhr-84 Caenorhabditis elegans WBGene00003674 D 0.814
CJA03481 Caenorhabditis japonica CJA03481 I 0.810
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.808
CJA28065 Caenorhabditis japonica CJA28065 I 0.806
CRE13011 Caenorhabditis remanei CRE13011 I 0.806
CBG27350 Caenorhabditis briggsae CBG27350 I 0.805
CRE18699 Caenorhabditis remanei CRE18699 I 0.805
CRE27862 Caenorhabditis remanei CRE27862 I 0.804
CBG14515 Caenorhabditis briggsae CBG14515 I 0.801
CBN12210 Caenorhabditis brenneri CBN12210 I 0.801
CJA02156 Caenorhabditis japonica CJA02156 I 0.801
CRE00301 Caenorhabditis remanei CRE00301 I 0.801
nhr-45 Caenorhabditis elegans WBGene00003635 I 0.801
L898_g19019 Steinernema monticolum L898_g19019 I 0.800
L898_g21763 Steinernema monticolum L898_g21763 I 0.799
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.795
L889_g6798 Steinernema feltiae L889_g6798 I 0.792
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.791
L892_g2782 Steinernema scapterisci L892_g2782 I 0.789
CBG06387 Caenorhabditis briggsae CBG06387 I 0.787
L889_g6797 Steinernema feltiae L889_g6797 I 0.781
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.779
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.778
CRE18698 Caenorhabditis remanei CRE18698 I 0.776
CJA19466 Caenorhabditis japonica CJA19466 I 0.774
L898_g12798 Steinernema monticolum L898_g12798 I 0.771
Minc14668 Meloidogyne incognita Minc14668 I 0.766
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.766
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.760
CRE08749 Caenorhabditis remanei CRE08749 I 0.759
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.758
L892_g14817 Steinernema scapterisci L892_g14817 I 0.758
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.752
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.750
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.749
CBG19169 Caenorhabditis briggsae CBG19169 I 0.748
CBG22870 Caenorhabditis briggsae CBG22870 I 0.745
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.745