CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g14596
(
Steinernema carpocapsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L596_g14596
T308945_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.864
0.486
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g14596.t1
Nuclear receptor
60
130
HLCQVCGAKSHGAHFQVQTCRACAAFFRRTCAGGRSYKCRRATKNCDVSKNAAFNCRYCRFEKCRKVGMKY
Links
Other
Nuclear receptor
family TFs
Other
Steinernema carpocapsae
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g6692
Steinernema feltiae
L889_g6692
I
0.991
L893_g18992
Steinernema glaseri
L893_g18992
I
0.989
L892_g2780
Steinernema scapterisci
L892_g2780
I
0.989
L889_g6694
Steinernema feltiae
L889_g6694
I
0.986
L898_g3515
Steinernema monticolum
L898_g3515
I
0.986
L596_g14590
Steinernema carpocapsae
L596_g14590
I
0.985
L889_g6695
Steinernema feltiae
L889_g6695
I
0.982
L596_g14589
Steinernema carpocapsae
L596_g14589
I
0.966
L898_g3514
Steinernema monticolum
L898_g3514
I
0.966
L892_g2781
Steinernema scapterisci
L892_g2781
I
0.959
L889_g6804
Steinernema feltiae
L889_g6804
I
0.913
L889_g8185
Steinernema feltiae
L889_g8185
I
0.912
L898_g12799
Steinernema monticolum
L898_g12799
I
0.909
L892_g10843
Steinernema scapterisci
L892_g10843
I
0.893
L898_g19012
Steinernema monticolum
L898_g19012
I
0.886
L898_g4015
Steinernema monticolum
L898_g4015
N
0.879
L596_g14532
Steinernema carpocapsae
L596_g14532
I
0.869
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.868
L898_g3512
Steinernema monticolum
L898_g3512
I
0.867
nhr-232
Caenorhabditis elegans
WBGene00012494
D
0.864
L893_g27930
Steinernema glaseri
L893_g27930
I
0.863
L893_g18993
Steinernema glaseri
L893_g18993
I
0.860
L596_g14580
Steinernema carpocapsae
L596_g14580
N
0.855
L889_g6806
Steinernema feltiae
L889_g6806
N
0.855
L898_g21763
Steinernema monticolum
L898_g21763
I
0.854
L596_g14541
Steinernema carpocapsae
L596_g14541
N
0.854
L596_g14586
Steinernema carpocapsae
L596_g14586
I
0.852
L898_g12798
Steinernema monticolum
L898_g12798
I
0.849
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.848
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.843
L889_g8187
Steinernema feltiae
L889_g8187
I
0.839
L596_g14537
Steinernema carpocapsae
L596_g14537
I
0.837
L892_g14818
Steinernema scapterisci
L892_g14818
I
0.835
L898_g19014
Steinernema monticolum
L898_g19014
I
0.832
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
0.830
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.827
CRE30948
Caenorhabditis remanei
CRE30948
I
0.826
L889_g6696
Steinernema feltiae
L889_g6696
I
0.825
SVUK_0002058501
Strongylus vulgaris
SVUK_0002058501
I
0.825
L596_g14533
Steinernema carpocapsae
L596_g14533
I
0.822
L889_g6792
Steinernema feltiae
L889_g6792
I
0.821
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.821
L893_g18997
Steinernema glaseri
L893_g18997
I
0.817
L893_g27943
Steinernema glaseri
L893_g27943
N
0.817
L892_g10842
Steinernema scapterisci
L892_g10842
I
0.816
CBG20729
Caenorhabditis briggsae
CBG20729
I
0.814
ACOC_0000492601
Angiostrongylus costaricensis
ACOC_0000492601
I
0.814
L898_g4012
Steinernema monticolum
L898_g4012
I
0.808
CRE15644
Caenorhabditis remanei
CRE15644
I
0.806
CBN23838
Caenorhabditis brenneri
CBN23838
I
0.806
CBG22870
Caenorhabditis briggsae
CBG22870
I
0.799
L889_g6803
Steinernema feltiae
L889_g6803
N
0.794
L893_g27935
Steinernema glaseri
L893_g27935
N
0.791
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
0.790
nhr-178
Caenorhabditis elegans
WBGene00017510
I
0.789
L898_g4018
Steinernema monticolum
L898_g4018
N
0.787
L898_g2943
Steinernema monticolum
L898_g2943
N
0.783
L596_g14536
Steinernema carpocapsae
L596_g14536
I
0.783
L892_g10840
Steinernema scapterisci
L892_g10840
N
0.782
CBG20727
Caenorhabditis briggsae
CBG20727
I
0.779
HPLM_0000277901
Haemonchus placei
HPLM_0000277901
I
0.777
ANCCEY_13226
Ancylostoma ceylanicum
ANCCEY_13226
I
0.777
HCOI00483700
Haemonchus contortus
HCOI00483700
I
0.777
CRE15675
Caenorhabditis remanei
CRE15675
I
0.776
L892_g14834
Steinernema scapterisci
L892_g14834
N
0.775
L898_g4016
Steinernema monticolum
L898_g4016
N
0.770
L892_g14817
Steinernema scapterisci
L892_g14817
I
0.766
CRE08691
Caenorhabditis remanei
CRE08691
I
0.761
nhr-54
Caenorhabditis elegans
WBGene00003644
I
0.758
PEQ_0000560101
Parascaris equorum
PEQ_0000560101
I
0.758
nhr-213
Caenorhabditis elegans
WBGene00011520
I
0.757
HCOI01190000
Haemonchus contortus
HCOI01190000
I
0.755
HPLM_0000974301
Haemonchus placei
HPLM_0000974301
I
0.755
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.750
nhr-170
Caenorhabditis elegans
WBGene00008309
I
0.749
nhr-231
Caenorhabditis elegans
WBGene00012449
I
0.745