NBR_0001834701 (Nippostrongylus brasiliensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 NBR_0001834701 T309738_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.906 0.571
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.841 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001834701-mRNA-1 Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Nippostrongylus brasiliensis TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g6696 Steinernema feltiae L889_g6696 I 0.947
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.937
L898_g3512 Steinernema monticolum L898_g3512 I 0.936
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.935
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.924
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.920
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.916
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.915
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.915
CBG20729 Caenorhabditis briggsae CBG20729 I 0.913
L892_g2782 Steinernema scapterisci L892_g2782 I 0.909
CBN23838 Caenorhabditis brenneri CBN23838 I 0.907
CRE15644 Caenorhabditis remanei CRE15644 I 0.907
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.906
CBG09567 Caenorhabditis briggsae CBG09567 I 0.903
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.899
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.899
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.899
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.897
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.897
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.896
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.894
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.889
CRE15675 Caenorhabditis remanei CRE15675 I 0.887
CBG20727 Caenorhabditis briggsae CBG20727 I 0.886
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.885
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.882
CBG09320 Caenorhabditis briggsae CBG09320 I 0.880
CRE31070 Caenorhabditis remanei CRE31070 I 0.880
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.876
CJA28065 Caenorhabditis japonica CJA28065 I 0.875
CRE30948 Caenorhabditis remanei CRE30948 I 0.874
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.872
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.871
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.869
L898_g3514 Steinernema monticolum L898_g3514 I 0.867
CBG22870 Caenorhabditis briggsae CBG22870 I 0.860
CRE08691 Caenorhabditis remanei CRE08691 I 0.860
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.852
L893_g18992 Steinernema glaseri L893_g18992 I 0.846
Minc14668 Meloidogyne incognita Minc14668 I 0.845
CBG06601 Caenorhabditis briggsae CBG06601 I 0.844
CBG06611 Caenorhabditis briggsae CBG06611 I 0.844
CBG19169 Caenorhabditis briggsae CBG19169 I 0.843
CRE18430 Caenorhabditis remanei CRE18430 I 0.843
CBN21486 Caenorhabditis brenneri CBN21486 I 0.842
CBN28290 Caenorhabditis brenneri CBN28290 I 0.842
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.841
L889_g6692 Steinernema feltiae L889_g6692 I 0.840
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.839
L898_g12798 Steinernema monticolum L898_g12798 I 0.837
CBN13569 Caenorhabditis brenneri CBN13569 I 0.834
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.832
L892_g2780 Steinernema scapterisci L892_g2780 I 0.832
L898_g3515 Steinernema monticolum L898_g3515 I 0.832
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.830
L889_g6804 Steinernema feltiae L889_g6804 I 0.829
CJA09697 Caenorhabditis japonica CJA09697 I 0.827
L892_g10843 Steinernema scapterisci L892_g10843 I 0.824
L596_g14589 Steinernema carpocapsae L596_g14589 I 0.821
PPA14290 Pristionchus pacificus PPA14290 I 0.820
nhr-30 Caenorhabditis elegans WBGene00016091 N 0.813
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.812
L889_g6694 Steinernema feltiae L889_g6694 I 0.812
L892_g2781 Steinernema scapterisci L892_g2781 I 0.803
CBG04928 Caenorhabditis briggsae CBG04928 I 0.797
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.797
L889_g6695 Steinernema feltiae L889_g6695 I 0.796
L892_g14834 Steinernema scapterisci L892_g14834 N 0.787
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.783
CBN13200 Caenorhabditis brenneri CBN13200 I 0.782
CRE10693 Caenorhabditis remanei CRE10693 I 0.782
CRE15097 Caenorhabditis remanei CRE15097 I 0.782
L893_g18997 Steinernema glaseri L893_g18997 I 0.780
CBG16982 Caenorhabditis briggsae CBG16982 I 0.765
L889_g6792 Steinernema feltiae L889_g6792 I 0.763
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.762
CBG06599 Caenorhabditis briggsae CBG06599 I 0.756
CBG06609 Caenorhabditis briggsae CBG06609 I 0.756
L893_g27930 Steinernema glaseri L893_g27930 I 0.753
CRE18699 Caenorhabditis remanei CRE18699 I 0.749