MhA1_Contig1192.frz3.gene3 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig1192.frz3.gene3 T309623_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.863 0.500
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.788 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig1192.frz3.gene3 Nuclear receptor 40 109

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc14668 Meloidogyne incognita Minc14668 I 0.989
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.986
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.973
maker-nMf.1.1.scaf01765-snap-gene-0.13 Meloidogyne floridensis maker-nMf.1.1.scaf01765-snap-gene-0.13 I 0.973
L898_g12798 Steinernema monticolum L898_g12798 I 0.917
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.901
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.893
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.885
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.885
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.885
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.883
L889_g6696 Steinernema feltiae L889_g6696 I 0.877
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.875
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.874
L898_g3512 Steinernema monticolum L898_g3512 I 0.871
L892_g14834 Steinernema scapterisci L892_g14834 N 0.869
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.866
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.863
BXY_1091100 Bursaphelenchus xylophilus BXY_1091100 N 0.861
CRE30948 Caenorhabditis remanei CRE30948 I 0.860
L892_g2782 Steinernema scapterisci L892_g2782 I 0.855
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.853
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.852
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.849
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.840
CRE08691 Caenorhabditis remanei CRE08691 I 0.835
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.835
CBG09567 Caenorhabditis briggsae CBG09567 I 0.832
L892_g8137 Steinernema scapterisci L892_g8137 N 0.831
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.829
CJA09697 Caenorhabditis japonica CJA09697 I 0.826
CBN13569 Caenorhabditis brenneri CBN13569 I 0.819
CBG20729 Caenorhabditis briggsae CBG20729 I 0.817
CBG06601 Caenorhabditis briggsae CBG06601 I 0.810
CBG06611 Caenorhabditis briggsae CBG06611 I 0.810
CRE18430 Caenorhabditis remanei CRE18430 I 0.810
CRE15675 Caenorhabditis remanei CRE15675 I 0.809
PPA14290 Pristionchus pacificus PPA14290 I 0.808
CRE27865 Caenorhabditis remanei CRE27865 N 0.806
CBN23838 Caenorhabditis brenneri CBN23838 I 0.803
CJA28065 Caenorhabditis japonica CJA28065 I 0.803
CRE15644 Caenorhabditis remanei CRE15644 I 0.803
CBG22870 Caenorhabditis briggsae CBG22870 I 0.797
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.788
L893_g9516 Steinernema glaseri L893_g9516 N 0.787
CBG09320 Caenorhabditis briggsae CBG09320 I 0.784
CBN21486 Caenorhabditis brenneri CBN21486 I 0.784
CBN28290 Caenorhabditis brenneri CBN28290 I 0.784
CRE31070 Caenorhabditis remanei CRE31070 I 0.784
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.784
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.784
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.780
CBG20727 Caenorhabditis briggsae CBG20727 I 0.779
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.776
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.775
SMUV_0000241401 Syphacia muris SMUV_0000241401 I 0.773
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.766
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.766
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.763
GPLIN_001629700 Globodera pallida GPLIN_001629700 N 0.752
L893_g18997 Steinernema glaseri L893_g18997 I 0.751
CRE09011 Caenorhabditis remanei CRE09011 I 0.750