CRE09011 (Caenorhabditis remanei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CRE09011 T302115_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-70
M00695_2.00 		Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN		 PBM
Narasimhan et al.(2015)
pTH9174 		0.760 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE09011 Nuclear receptor 18 87

Links

Other Nuclear receptor family TFs
Other Caenorhabditis remanei TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN18264 Caenorhabditis brenneri CBN18264 I 0.985
CBG04789 Caenorhabditis briggsae CBG04789 I 0.983
nhr-53 Caenorhabditis elegans WBGene00003643 I 0.983
L889_g10781 Steinernema feltiae L889_g10781 I 0.869
ASIM_0000109601 Anisakis simplex ASIM_0000109601 N 0.868
TCNE_0001892601 Toxocara canis TCNE_0001892601 N 0.854
BXY_1598800 Bursaphelenchus xylophilus BXY_1598800 N 0.851
CBG17366 Caenorhabditis briggsae CBG17366 N 0.850
nhr-205 Caenorhabditis elegans WBGene00011002 N 0.845
CBG16375 Caenorhabditis briggsae CBG16375 I 0.828
CJA10576 Caenorhabditis japonica CJA10576 I 0.823
CRE27175 Caenorhabditis remanei CRE27175 N 0.823
nhr-28 Caenorhabditis elegans WBGene00003624 I 0.823
L596_g27786 Steinernema carpocapsae L596_g27786 I 0.822
nhr-12 Caenorhabditis elegans WBGene00003611 I 0.819
L892_g8144 Steinernema scapterisci L892_g8144 I 0.814
GPLIN_000628500 Globodera pallida GPLIN_000628500 N 0.813
GPLIN_000805100 Globodera pallida GPLIN_000805100 N 0.813
L898_g28806 Steinernema monticolum L898_g28806 I 0.811
CBN03769 Caenorhabditis brenneri CBN03769 I 0.809
CBN16902 Caenorhabditis brenneri CBN16902 I 0.807
CBN15963 Caenorhabditis brenneri CBN15963 N 0.805
scaffold1235-EXSNAP2012.2 Pristionchus exspectatus scaffold1235-EXSNAP2012.2 I 0.805
BXY_0973100 Bursaphelenchus xylophilus BXY_0973100 I 0.804
ASU_03038 Ascaris suum ASU_03038 N 0.797
L893_g4569 Steinernema glaseri L893_g4569 I 0.796
L898_g9580 Steinernema monticolum L898_g9580 I 0.796
nhr-273 Caenorhabditis elegans WBGene00020460 I 0.794
L892_g8145 Steinernema scapterisci L892_g8145 I 0.794
CBG12152 Caenorhabditis briggsae CBG12152 I 0.792
CRE18529 Caenorhabditis remanei CRE18529 I 0.792
Minc14668 Meloidogyne incognita Minc14668 I 0.787
L893_g3450 Steinernema glaseri L893_g3450 N 0.785
CBG20699 Caenorhabditis briggsae CBG20699 I 0.782
CRE27174 Caenorhabditis remanei CRE27174 I 0.781
L889_g16048 Steinernema feltiae L889_g16048 N 0.781
CRE27659 Caenorhabditis remanei CRE27659 I 0.778
PPA29361 Pristionchus pacificus PPA29361 I 0.778
L892_g8146 Steinernema scapterisci L892_g8146 N 0.778
L893_g2090 Steinernema glaseri L893_g2090 I 0.777
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.775
L596_g24910 Steinernema carpocapsae L596_g24910 N 0.773
scaffold28-EXSNAP2012.86 Pristionchus exspectatus scaffold28-EXSNAP2012.86 N 0.772
CRE07801 Caenorhabditis remanei CRE07801 I 0.766
nhr-16 Caenorhabditis elegans WBGene00003615 I 0.766
SMUV_0000909301 Syphacia muris SMUV_0000909301 I 0.764
nhr-70 Caenorhabditis elegans WBGene00003660 D 0.760
nhr-109 Caenorhabditis elegans WBGene00003699 I 0.760
CBN04619 Caenorhabditis brenneri CBN04619 I 0.755
L889_g9698 Steinernema feltiae L889_g9698 I 0.751
L889_g987 Steinernema feltiae L889_g987 I 0.751
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.750