CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold28-EXSNAP2012.86
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold28-EXSNAP2012.86
T310240_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold28-EXSNAP2012.86
Nuclear receptor
19
88
AICEVCQDLSDGLHFSVYTCRACAAFFRRTVSLKLEYTCRSDGRCPIEKSARNMCRSCRFAKCMNVGMQA
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ASU_03038
Ascaris suum
ASU_03038
N
0.960
TCNE_0001892601
Toxocara canis
TCNE_0001892601
N
0.948
L898_g9580
Steinernema monticolum
L898_g9580
I
0.947
L889_g16048
Steinernema feltiae
L889_g16048
N
0.934
L892_g8146
Steinernema scapterisci
L892_g8146
N
0.933
BXY_0973100
Bursaphelenchus xylophilus
BXY_0973100
I
0.930
L893_g3450
Steinernema glaseri
L893_g3450
N
0.930
L596_g24910
Steinernema carpocapsae
L596_g24910
N
0.929
ASIM_0000109601
Anisakis simplex
ASIM_0000109601
N
0.914
CBG17366
Caenorhabditis briggsae
CBG17366
N
0.898
ACAC_0000388601
Angiostrongylus cantonensis
ACAC_0000388601
N
0.886
GPLIN_000628500
Globodera pallida
GPLIN_000628500
N
0.882
GPLIN_000805100
Globodera pallida
GPLIN_000805100
N
0.882
CBN03149
Caenorhabditis brenneri
CBN03149
N
0.874
nhr-33
Caenorhabditis elegans
WBGene00013976
N
0.857
BXY_1598800
Bursaphelenchus xylophilus
BXY_1598800
N
0.843
nhr-53
Caenorhabditis elegans
WBGene00003643
I
0.808
CBG04789
Caenorhabditis briggsae
CBG04789
I
0.802
CRE27175
Caenorhabditis remanei
CRE27175
N
0.800
CBN18264
Caenorhabditis brenneri
CBN18264
I
0.797
CRE09011
Caenorhabditis remanei
CRE09011
I
0.772
SMUV_0000909301
Syphacia muris
SMUV_0000909301
I
0.768
PPA29361
Pristionchus pacificus
PPA29361
I
0.762
EVEC_0001095701
Enterobius vermicularis
EVEC_0001095701
I
0.751
L889_g10781
Steinernema feltiae
L889_g10781
I
0.749