CBG15881 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG15881 T301549_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.863 0.514
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.791 0.486
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.756 0.514
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.756 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG15881 Nuclear receptor 29 99

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE05044 Caenorhabditis remanei CRE05044 I 0.987
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.915
CBN28290 Caenorhabditis brenneri CBN28290 I 0.881
CBN21486 Caenorhabditis brenneri CBN21486 I 0.881
CRE31070 Caenorhabditis remanei CRE31070 I 0.881
CBG09320 Caenorhabditis briggsae CBG09320 I 0.881
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.878
L889_g6798 Steinernema feltiae L889_g6798 I 0.877
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.877
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.869
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.869
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.869
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.867
CJA28065 Caenorhabditis japonica CJA28065 I 0.866
CRE18698 Caenorhabditis remanei CRE18698 I 0.865
L889_g6797 Steinernema feltiae L889_g6797 I 0.863
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.863
L893_g18993 Steinernema glaseri L893_g18993 I 0.861
L898_g21763 Steinernema monticolum L898_g21763 I 0.859
L898_g19019 Steinernema monticolum L898_g19019 I 0.857
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.852
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.843
L889_g6799 Steinernema feltiae L889_g6799 I 0.838
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.831
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.831
CRE08753 Caenorhabditis remanei CRE08753 I 0.829
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.827
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.823
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.808
CJA19466 Caenorhabditis japonica CJA19466 I 0.801
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.799
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.796
CBG04928 Caenorhabditis briggsae CBG04928 I 0.795
CBG06387 Caenorhabditis briggsae CBG06387 I 0.793
L892_g14817 Steinernema scapterisci L892_g14817 I 0.792
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.791
CBG09567 Caenorhabditis briggsae CBG09567 I 0.784
CRE08754 Caenorhabditis remanei CRE08754 I 0.781
CRE30948 Caenorhabditis remanei CRE30948 I 0.780
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.775
CBG06609 Caenorhabditis briggsae CBG06609 I 0.765
CBG06599 Caenorhabditis briggsae CBG06599 I 0.765
CBG16982 Caenorhabditis briggsae CBG16982 I 0.757
CRE08755 Caenorhabditis remanei CRE08755 I 0.756
L892_g2782 Steinernema scapterisci L892_g2782 I 0.756
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.756