CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE08755
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE08755
T302108_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG01250
M02391_2.00
Caenorhabditis briggsae
WBYGTGTC
GACACRVW
PBM
Weirauch et al.(2014)
pTH6110
0.925
0.657
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.882
0.529
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.882
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE08755
Nuclear receptor
9
81
GPCEICSQPAHGRHFGVMSCRACAAFFRRAATSKTLRVQDKVCKTGKCTIFEDGKYRCKSCRLQKCLAVGMDV
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE08754
Caenorhabditis remanei
CRE08754
I
0.955
nhr-130
Caenorhabditis elegans
WBGene00003720
I
0.945
nhr-184
Caenorhabditis elegans
WBGene00018415
I
0.945
CBG06387
Caenorhabditis briggsae
CBG06387
I
0.942
CBG01250
Caenorhabditis briggsae
CBG01250
D
0.925
CJA19466
Caenorhabditis japonica
CJA19466
I
0.900
CBG01251
Caenorhabditis briggsae
CBG01251
I
0.898
nhr-133
Caenorhabditis elegans
WBGene00003723
I
0.889
nhr-182
Caenorhabditis elegans
WBGene00018265
D
0.882
CRE08753
Caenorhabditis remanei
CRE08753
I
0.881
nhr-190
Caenorhabditis elegans
WBGene00018622
I
0.881
WBGene00003673
Caenorhabditis elegans
WBGene00003673
I
0.873
CBG17906
Caenorhabditis briggsae
CBG17906
I
0.869
CBG01243
Caenorhabditis briggsae
CBG01243
I
0.868
CBG01353
Caenorhabditis briggsae
CBG01353
I
0.864
nhr-183
Caenorhabditis elegans
WBGene00018266
I
0.854
CRE08762
Caenorhabditis remanei
CRE08762
I
0.848
CRE08760
Caenorhabditis remanei
CRE08760
I
0.831
CBG01245
Caenorhabditis briggsae
CBG01245
N
0.825
CRE05044
Caenorhabditis remanei
CRE05044
I
0.822
CBN00299
Caenorhabditis brenneri
CBN00299
I
0.816
CRE08749
Caenorhabditis remanei
CRE08749
I
0.813
CBG01246
Caenorhabditis briggsae
CBG01246
N
0.811
CBN03087
Caenorhabditis brenneri
CBN03087
I
0.808
CBG01229
Caenorhabditis briggsae
CBG01229
N
0.807
nhr-212
Caenorhabditis elegans
WBGene00020153
I
0.798
CRE14845
Caenorhabditis remanei
CRE14845
I
0.794
CRE18698
Caenorhabditis remanei
CRE18698
I
0.791
nhr-179
Caenorhabditis elegans
WBGene00017512
I
0.789
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.787
CBN21664
Caenorhabditis brenneri
CBN21664
N
0.786
nhr-106
Caenorhabditis elegans
WBGene00003696
N
0.780
CRE05778
Caenorhabditis remanei
CRE05778
I
0.778
nhr-202
Caenorhabditis elegans
WBGene00019742
I
0.775
nhr-201
Caenorhabditis elegans
WBGene00019741
I
0.773
CBG17898
Caenorhabditis briggsae
CBG17898
I
0.769
nhr-228
Caenorhabditis elegans
WBGene00020852
N
0.764
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.757
CBG15881
Caenorhabditis briggsae
CBG15881
I
0.756
CBG01248
Caenorhabditis briggsae
CBG01248
I
0.753
CBG01235
Caenorhabditis briggsae
CBG01235
I
0.751
CBN15241
Caenorhabditis brenneri
CBN15241
I
0.751
CRE08751
Caenorhabditis remanei
CRE08751
I
0.751
CBN18082
Caenorhabditis brenneri
CBN18082
I
0.746
NBR_0001218401
Nippostrongylus brasiliensis
NBR_0001218401
I
0.746