CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG01229
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG01229
T301414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG01229
Nuclear receptor
12
78
FACKVCNQAAHGNHFGVISCRACAAFFRRSASSKWSKMSCRGGSCDQETYSCKPCRLQKCRDAGMDT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN21664
Caenorhabditis brenneri
CBN21664
N
0.977
nhr-228
Caenorhabditis elegans
WBGene00020852
N
0.960
CRE09175
Caenorhabditis remanei
CRE09175
N
0.955
CRE27865
Caenorhabditis remanei
CRE27865
N
0.919
nhr-115
Caenorhabditis elegans
WBGene00003705
N
0.919
CRE18699
Caenorhabditis remanei
CRE18699
I
0.882
nhr-180
Caenorhabditis elegans
WBGene00017961
I
0.875
CRE18696
Caenorhabditis remanei
CRE18696
N
0.874
CBN07208
Caenorhabditis brenneri
CBN07208
N
0.866
CRE19030
Caenorhabditis remanei
CRE19030
N
0.866
nhr-95
Caenorhabditis elegans
WBGene00003685
N
0.864
CBG01246
Caenorhabditis briggsae
CBG01246
N
0.848
CBG17906
Caenorhabditis briggsae
CBG17906
I
0.848
nhr-226
Caenorhabditis elegans
WBGene00020850
N
0.836
CBG10448
Caenorhabditis briggsae
CBG10448
N
0.829
CBN15241
Caenorhabditis brenneri
CBN15241
I
0.822
CRE08751
Caenorhabditis remanei
CRE08751
I
0.822
CRE19032
Caenorhabditis remanei
CRE19032
N
0.822
nhr-225
Caenorhabditis elegans
WBGene00020849
N
0.811
CRE09222
Caenorhabditis remanei
CRE09222
I
0.809
CRE08755
Caenorhabditis remanei
CRE08755
I
0.807
nhr-55
Caenorhabditis elegans
WBGene00003645
I
0.792
nhr-125
Caenorhabditis elegans
WBGene00003715
I
0.787
CBG01243
Caenorhabditis briggsae
CBG01243
I
0.777
CRE09173
Caenorhabditis remanei
CRE09173
N
0.777
CBG01235
Caenorhabditis briggsae
CBG01235
I
0.751