CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-228
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00020852
T306375_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T27B7.6a
Nuclear receptor
11
77
FCCRICDQRAHGNHFGVISCRACAAFFRRTASGKWDNQKCRGGSCDKKTYYCKPCRLQKCRDMGMDT
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN21664
Caenorhabditis brenneri
CBN21664
N
0.982
CRE09175
Caenorhabditis remanei
CRE09175
N
0.972
CBG01229
Caenorhabditis briggsae
CBG01229
N
0.960
CRE27865
Caenorhabditis remanei
CRE27865
N
0.957
nhr-180
Caenorhabditis elegans
WBGene00017961
I
0.936
nhr-95
Caenorhabditis elegans
WBGene00003685
N
0.929
CBN07208
Caenorhabditis brenneri
CBN07208
N
0.924
nhr-115
Caenorhabditis elegans
WBGene00003705
N
0.906
CBG10448
Caenorhabditis briggsae
CBG10448
N
0.901
CRE19030
Caenorhabditis remanei
CRE19030
N
0.890
CRE18696
Caenorhabditis remanei
CRE18696
N
0.885
CBG17906
Caenorhabditis briggsae
CBG17906
I
0.867
CRE09174
Caenorhabditis remanei
CRE09174
N
0.847
CBG01246
Caenorhabditis briggsae
CBG01246
N
0.825
nhr-125
Caenorhabditis elegans
WBGene00003715
I
0.825
nhr-225
Caenorhabditis elegans
WBGene00020849
N
0.808
CBG01243
Caenorhabditis briggsae
CBG01243
I
0.803
CRE09173
Caenorhabditis remanei
CRE09173
N
0.796
WBGene00020591
Caenorhabditis elegans
WBGene00020591
N
0.790
nhr-55
Caenorhabditis elegans
WBGene00003645
I
0.787
CRE08755
Caenorhabditis remanei
CRE08755
I
0.764
nhr-226
Caenorhabditis elegans
WBGene00020850
N
0.751
CBG01245
Caenorhabditis briggsae
CBG01245
N
0.747