CBG17898 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG17898 T301566_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.807 0.471
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.807 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG17898 Nuclear receptor 3 74

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-106 Caenorhabditis elegans WBGene00003696 N 0.888
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.855
CRE19033 Caenorhabditis remanei CRE19033 I 0.845
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.807
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.805
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.797
CBG01353 Caenorhabditis briggsae CBG01353 I 0.793
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.789
CBG06387 Caenorhabditis briggsae CBG06387 I 0.781
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.781
nhr-99 Caenorhabditis elegans WBGene00003689 I 0.779
nhr-190 Caenorhabditis elegans WBGene00018622 I 0.777
CBG06379 Caenorhabditis briggsae CBG06379 N 0.772
CRE08755 Caenorhabditis remanei CRE08755 I 0.769
CBG17906 Caenorhabditis briggsae CBG17906 I 0.758
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.756
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.749