nhr-99 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003689 T306211_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.830 0.529
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.830 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
M02H5.1 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-98 Caenorhabditis elegans WBGene00003688 I 0.982
nhr-123 Caenorhabditis elegans WBGene00003713 I 0.980
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.980
nhr-202 Caenorhabditis elegans WBGene00019742 I 0.976
CRE09225 Caenorhabditis remanei CRE09225 N 0.952
CBN17580 Caenorhabditis brenneri CBN17580 N 0.947
nhr-203 Caenorhabditis elegans WBGene00019743 N 0.941
CBG01353 Caenorhabditis briggsae CBG01353 I 0.939
CBG01357 Caenorhabditis briggsae CBG01357 N 0.937
CRE09224 Caenorhabditis remanei CRE09224 N 0.911
CRE09227 Caenorhabditis remanei CRE09227 N 0.910
CBG01352 Caenorhabditis briggsae CBG01352 I 0.903
CBG01359 Caenorhabditis briggsae CBG01359 N 0.886
CBN03087 Caenorhabditis brenneri CBN03087 I 0.855
CRE09222 Caenorhabditis remanei CRE09222 I 0.838
nhr-55 Caenorhabditis elegans WBGene00003645 I 0.831
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.830
CBG19144 Caenorhabditis briggsae CBG19144 I 0.804
CRE14845 Caenorhabditis remanei CRE14845 I 0.798
CBG17898 Caenorhabditis briggsae CBG17898 I 0.779
CBG04928 Caenorhabditis briggsae CBG04928 I 0.761
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.758
CBG06387 Caenorhabditis briggsae CBG06387 I 0.754
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.751