CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE14845
(
Caenorhabditis remanei
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CRE14845
T302186_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-177
M02419_2.00
Caenorhabditis elegans
TCGRGANY
RNTCYCGA
PBM
Weirauch et al.(2014)
pTH9044
0.889
0.529
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.853
0.500
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.853
0.500
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE14845
Nuclear receptor
17
88
QKCQICSQPAHGQHFGAVTCRACAAFFRRCHFSKEAKPKCRNMKFKCNPDENGRWSCKKCRLDRCLGHGMST
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis remanei
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG19144
Caenorhabditis briggsae
CBG19144
I
0.989
nhr-117
Caenorhabditis elegans
WBGene00003707
I
0.974
CRE05779
Caenorhabditis remanei
CRE05779
I
0.957
CRE16082
Caenorhabditis remanei
CRE16082
I
0.953
CBN00299
Caenorhabditis brenneri
CBN00299
I
0.951
CRE18428
Caenorhabditis remanei
CRE18428
I
0.949
CBG06614
Caenorhabditis briggsae
CBG06614
I
0.941
CBG01353
Caenorhabditis briggsae
CBG01353
I
0.928
CRE05778
Caenorhabditis remanei
CRE05778
I
0.921
CRE14847
Caenorhabditis remanei
CRE14847
I
0.906
nhr-110
Caenorhabditis elegans
WBGene00003700
I
0.904
CBG19141
Caenorhabditis briggsae
CBG19141
I
0.900
nhr-44
Caenorhabditis elegans
WBGene00003634
I
0.899
nhr-179
Caenorhabditis elegans
WBGene00017512
I
0.893
nhr-177
Caenorhabditis elegans
WBGene00017503
D
0.889
CRE14848
Caenorhabditis remanei
CRE14848
I
0.874
CJA03572
Caenorhabditis japonica
CJA03572
I
0.865
CBG06387
Caenorhabditis briggsae
CBG06387
I
0.860
CJA19466
Caenorhabditis japonica
CJA19466
I
0.859
nhr-182
Caenorhabditis elegans
WBGene00018265
D
0.853
nhr-55
Caenorhabditis elegans
WBGene00003645
I
0.851
nhr-130
Caenorhabditis elegans
WBGene00003720
I
0.848
nhr-183
Caenorhabditis elegans
WBGene00018266
I
0.843
CRE12950
Caenorhabditis remanei
CRE12950
I
0.826
nhr-201
Caenorhabditis elegans
WBGene00019741
I
0.824
CRE09222
Caenorhabditis remanei
CRE09222
I
0.816
CRE01447
Caenorhabditis remanei
CRE01447
N
0.804
nhr-99
Caenorhabditis elegans
WBGene00003689
I
0.798
CRE08749
Caenorhabditis remanei
CRE08749
I
0.796
CRE08755
Caenorhabditis remanei
CRE08755
I
0.794
nhr-98
Caenorhabditis elegans
WBGene00003688
I
0.794
nhr-202
Caenorhabditis elegans
WBGene00019742
I
0.785
CRE08754
Caenorhabditis remanei
CRE08754
I
0.783
CRE14846
Caenorhabditis remanei
CRE14846
I
0.774
nhr-123
Caenorhabditis elegans
WBGene00003713
I
0.773
nhr-143
Caenorhabditis elegans
WBGene00019116
I
0.756
WBGene00003673
Caenorhabditis elegans
WBGene00003673
I
0.750
CRE18699
Caenorhabditis remanei
CRE18699
I
0.747
nhr-133
Caenorhabditis elegans
WBGene00003723
I
0.747