nhr-179 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00017512 T306339_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.803 0.471
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.803 0.471
CBG01250
M02391_2.00 		Caenorhabditis briggsae
WBYGTGTC
GACACRVW		 PBM
Weirauch et al.(2014)
pTH6110 		0.745 0.486
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
F16B4.11a Nuclear receptor 29 100
F16B4.11b Nuclear receptor 29 100

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.921
CRE05778 Caenorhabditis remanei CRE05778 I 0.910
CBG06614 Caenorhabditis briggsae CBG06614 I 0.910
CRE14845 Caenorhabditis remanei CRE14845 I 0.893
CJA19466 Caenorhabditis japonica CJA19466 I 0.884
CBG19144 Caenorhabditis briggsae CBG19144 I 0.883
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.864
CRE18428 Caenorhabditis remanei CRE18428 I 0.856
CRE16082 Caenorhabditis remanei CRE16082 I 0.848
nhr-125 Caenorhabditis elegans WBGene00003715 I 0.835
CBG06387 Caenorhabditis briggsae CBG06387 I 0.834
CRE18698 Caenorhabditis remanei CRE18698 I 0.830
CRE05779 Caenorhabditis remanei CRE05779 I 0.823
CBG19141 Caenorhabditis briggsae CBG19141 I 0.823
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.803
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.802
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.802
CRE08749 Caenorhabditis remanei CRE08749 I 0.797
CRE08755 Caenorhabditis remanei CRE08755 I 0.789
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.782
CJA03572 Caenorhabditis japonica CJA03572 I 0.776
CRE14847 Caenorhabditis remanei CRE14847 I 0.771
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.767
CRE14848 Caenorhabditis remanei CRE14848 I 0.765
nhr-133 Caenorhabditis elegans WBGene00003723 I 0.751
CBG17906 Caenorhabditis briggsae CBG17906 I 0.751
CBG01250 Caenorhabditis briggsae CBG01250 D 0.745