CBG19141 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 CBG19141 T301579_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-182
M00701_2.00 		Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH		 PBM
Narasimhan et al.(2015)
pTH10779 		0.854 0.500
nhr-182
M00702_2.00 		Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN		 PBM
Narasimhan et al.(2015)
pTH6106 		0.854 0.500
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.834 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG19141 Nuclear receptor 25 96

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE14848 Caenorhabditis remanei CRE14848 I 0.989
nhr-44 Caenorhabditis elegans WBGene00003634 I 0.989
CRE14847 Caenorhabditis remanei CRE14847 I 0.987
CJA03572 Caenorhabditis japonica CJA03572 I 0.985
CRE01447 Caenorhabditis remanei CRE01447 N 0.971
CBG06387 Caenorhabditis briggsae CBG06387 I 0.916
nhr-110 Caenorhabditis elegans WBGene00003700 I 0.905
CJA19466 Caenorhabditis japonica CJA19466 I 0.902
CRE14845 Caenorhabditis remanei CRE14845 I 0.900
CBG19144 Caenorhabditis briggsae CBG19144 I 0.899
nhr-130 Caenorhabditis elegans WBGene00003720 I 0.894
CRE05778 Caenorhabditis remanei CRE05778 I 0.882
nhr-195 Caenorhabditis elegans WBGene00019115 N 0.878
nhr-182 Caenorhabditis elegans WBGene00018265 D 0.854
nhr-117 Caenorhabditis elegans WBGene00003707 I 0.851
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.834
nhr-179 Caenorhabditis elegans WBGene00017512 I 0.823
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.823
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.823
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.823
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.823
CRE30948 Caenorhabditis remanei CRE30948 I 0.819
CBG09567 Caenorhabditis briggsae CBG09567 I 0.814
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.811
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.809
CBN00299 Caenorhabditis brenneri CBN00299 I 0.804
CRE16082 Caenorhabditis remanei CRE16082 I 0.800
CRE08749 Caenorhabditis remanei CRE08749 I 0.783
nhr-212 Caenorhabditis elegans WBGene00020153 I 0.771
CRE18428 Caenorhabditis remanei CRE18428 I 0.764
CRE18698 Caenorhabditis remanei CRE18698 I 0.757
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.754
nhr-201 Caenorhabditis elegans WBGene00019741 I 0.749
nhr-143 Caenorhabditis elegans WBGene00019116 I 0.748