CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NECAME_01500
(
Necator americanus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NECAME_01500
T309784_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.822
0.529
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NECAME_01500
Nuclear receptor
6
76
RCCRVCCDRSDGAHFGIDSCRACAAFFRRSIAMKKKYICRQGSNTCDISKSVRCICRKCRLEKCLLAGMLP
Links
Other
Nuclear receptor
family TFs
Other
Necator americanus
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001332
Calypte anna
Aan_R001332
N
Afo_R005242
Aptenodytes forsteri
Afo_R005242
N
Brh_R001964
Buceros rhinoceros
Brh_R001964
N
Cmyd_10010214
Chelonia mydas
Cmyd_10010214
N
MTERF3
Anolis carolinensis
ENSACAG00000004143
N
ENSAPLG00000012750
Anas platyrhynchos
ENSAPLG00000012750
N
ENSFALG00000005635
Ficedula albicollis
ENSFALG00000005635
N
MTERF3
Procavia capensis
ENSPCAG00000009302
N
MTERF3
Taeniopygia guttata
ENSTGUG00000011961
N
Gfo_R014552
Geospiza fortis
Gfo_R014552
N
Tal_R006331
Tyto alba
Tal_R006331
N