SMUV_0000795201 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000795201 T310423_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.879 0.629
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.747 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000795201-mRNA-1 Nuclear receptor 13 82

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA009757 Anopheles arabiensis AARA009757 I
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I
ACUA003826 Anopheles culicifacies ACUA003826 I
AEPI001687 Anopheles epiroticus AEPI001687 I
AMIN002618 Anopheles minimus AMIN002618 I
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I
D917_07791 Trichinella nativa D917_07791 I
D918_02805 Trichuris suis D918_02805 I
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I
ENSGACG00000014345 Gasterosteus aculeatus ENSGACG00000014345 I
ENSONIG00000012467 Oreochromis niloticus ENSONIG00000012467 I
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I
PROX2 Tupaia belangeri ENSTBEG00000014423 I
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I
e_gw.483.46.1 Branchiostoma floridae e_gw.483.46.1 I
HCOI02128500 Haemonchus contortus HCOI02128500 I
NECAME_07738 Necator americanus NECAME_07738 I
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I
PPAI010076 Phlebotomus papatasi PPAI010076 I
Sakowv30019049m.g Saccoglossus kowalevskii Sakowv30019049m.g N
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I
SINV18378 Solenopsis invicta SINV18378 I
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I
YQE_10516 Dendroctonus ponderosae YQE_10516 I