Cmyd_10000491 (Chelonia mydas)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00870 (P53) IPR011615 Cmyd_10000491 T311228_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.719 0.719
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.719 0.719
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.719 0.719
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.719 0.719
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.719 0.719
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.719 0.719
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.719 0.719
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.719 0.719
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10000491 p53 61 256

Links

Other p53 family TFs
Other Chelonia mydas TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
1967_YBR240C Saccharomyces paradoxus 1967_YBR240C I
2117_YBR240C Saccharomyces bayanus 2117_YBR240C I
4848_YBR240C Saccharomyces mikatae 4848_YBR240C I
AACERI_AaceriAFL033W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL033W I
AGOS_AFL033W Ashbya gossypii AGOS_AFL033W I
Ecym_2263 Eremothecium cymbalariae Ecym_2263 I
KAFR_0G03520 Kazachstania africana KAFR_0G03520 I
KLLA0_F10373g Kluyveromyces lactis KLLA0_F10373g I
KLTH0H05720g Lachancea thermotolerans KLTH0H05720g I
KLTH0H05720g Kluyveromyces thermotolerans KLTH0H05720g I
Kwal_1631 Kluyveromyces waltii Kwal_1631 I
LALA0_S13e03268g Lachancea lanzarotensis LALA0_S13e03268g I
NCAS_0H01240 Naumovozyma castellii NCAS_0H01240 I
NDAI_0F02050 Naumovozyma dairenensis NDAI_0F02050 I
SAKL0A06072g Lachancea kluyveri SAKL0A06072g I
Scas_Contig597.4 Saccharomyces castellii Scas_Contig597.4 I
SKUD_138702 Saccharomyces kudriavzevii SKUD_138702 I
SU7_0277 Saccharomyces arboricola SU7_0277 I
TDEL_0B04000 Torulaspora delbrueckii TDEL_0B04000 I
THI2 Saccharomyces cerevisiae YBR240C D
ZBAI_04285 Zygosaccharomyces bailii ZBAI_04285 I
ZBAI_07794 Zygosaccharomyces bailii ZBAI_07794 I
ZYRO0G21626g Zygosaccharomyces rouxii ZYRO0G21626g I