Cmyd_10000491 (Chelonia mydas)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00870 (P53) IPR011615 Cmyd_10000491 T311228_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TP53
M09337_2.00 		Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH		 Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A 		0.719 0.719
TP53
M09621_2.00 		Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN		 Misc
Heinz et al.(2010)
Saos-p53 		0.719 0.719
TP53
M11197_2.00 		Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY		 Transfac
Matys et al.(2006)
V$P53_01 		0.719 0.719
TP53
M11198_2.00 		Homo sapiens
NGRCWTGYYY
RRRCAWGYCN		 Transfac
Matys et al.(2006)
V$P53_02 		0.719 0.719
TP53
M11199_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_03 		0.719 0.719
TP53
M11200_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_04 		0.719 0.719
TP53
M11201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_05 		0.719 0.719
TP53
M11202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3_01 		0.719 0.719
TP53
M11203_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$P53_Q3 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10000491 p53 61 256

Links

Other p53 family TFs
Other Chelonia mydas TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000013302 Pelodiscus sinensis ENSPSIG00000013302 I 0.903
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I 0.815
Alligator_sinensis_CCG007355.2 Alligator sinensis Alligator_sinensis_CCG007355.2 N 0.796
ENSLOCG00000013832 Lepisosteus oculatus ENSLOCG00000013832 N 0.786
ENSLACG00000014014 Latimeria chalumnae ENSLACG00000014014 N 0.765
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.755
tp53 Danio rerio ENSDARG00000035559 I 0.754
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.745
TP53 Felis catus ENSFCAG00000009623 I 0.745
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.745
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.745
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.745
tp53.L Xenopus laevis XB-GENE-6252168 N 0.745
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.740
TP53 Sus scrofa ENSSSCG00000017950 I 0.740
tp53 Xenopus tropicalis XB-GENE-484286 N 0.740
TP53 Cavia porcellus ENSCPOG00000014252 I 0.738
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.735
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.735
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.735
Pvit_02042 Pogona vitticeps Pvit_02042 N 0.733
TP53 Homo sapiens ENSG00000141510 D 0.732
TP53 Ochotona princeps ENSOPRG00000006441 I 0.732
TP53 Bos taurus ENSBTAG00000001069 I 0.730
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.730
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.730
TP53 Macaca mulatta ENSMMUG00000008639 I 0.730
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.730
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.730
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.730
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.730
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.728
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.726
TP53 Canis familiaris ENSCAFG00000016714 I 0.724
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.724
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.724
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.723
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.723
TP53 Pan troglodytes ENSPTRG00000008703 I 0.719
TP53 Sorex araneus ENSSARG00000006206 I 0.719
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.718
TP53 Procavia capensis ENSPCAG00000012725 I 0.714
TP53 Microcebus murinus ENSMICG00000014853 I 0.713
ENSNLEG00000009730 Nomascus leucogenys ENSNLEG00000009730 I 0.703