CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TP53
(
Ochotona princeps
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00870 (P53)
IPR011615
ENSOPRG00000006441
T311113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TP53
M09337_2.00
Homo sapiens
DRRCWTGYYCAGRCATGYYY
RRRCATGYCTGRRCAWGYYH
Misc
Kulakovskiy et al.(2013)
P53_HUMAN.H11MO.0.A
0.907
0.907
TP53
M09621_2.00
Homo sapiens
NNDRCAWGYHNNDRCWWGYH
DRCWWGYHNNDRCWTGYHNN
Misc
Heinz et al.(2010)
Saos-p53
0.907
0.907
TP53
M11197_2.00
Homo sapiens
RGACATGCCCGGGCATGTYC
GRACATGCCCGGGCATGTCY
Transfac
Matys et al.(2006)
V$P53_01
0.907
0.907
TP53
M11198_2.00
Homo sapiens
NGRCWTGYYY
RRRCAWGYCN
Transfac
Matys et al.(2006)
V$P53_02
0.907
0.907
TP53
M11199_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_03
0.907
0.907
TP53
M11200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_04
0.907
0.907
TP53
M11201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_05
0.907
0.907
TP53
M11202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3_01
0.907
0.907
TP53
M11203_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P53_Q3
0.907
0.907
Trp53
M03439_2.00
Mus musculus
ACWTGYYNHHDSACWTGT
ACAWGTSHDDNRRCAWGT
SELEX
Jolma et al.(2013)
Tp53_1
0.866
0.866
Trp53
M03440_2.00
Mus musculus
ACWTGTYHNNGACWTGT
ACAWGTCNNDRACAWGT
SELEX
Jolma et al.(2013)
Tp53_2
0.866
0.866
Trp53
M03441_2.00
Mus musculus
RACATGYCYRGRCATGTY
RACATGYCYRGRCATGTY
SELEX
Jolma et al.(2013)
Tp53_3
0.866
0.866
Trp53
M09340_2.00
Mus musculus
RRRCAWGYCCRGRCADGYMH
DKRCHTGYCYGGRCWTGYYY
Misc
Kulakovskiy et al.(2013)
P53_MOUSE.H11MO.0.A
0.866
0.866
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000005906
p53
78
271
FSVPSQNTYPGTYGFRLGFLQSGTAKSVTCTYSPSLNKLFCQLAKTCPVQLKVDSTPPPGTRVRAMAIYKKSQHVTEIVKRCPHHERCSDSDGLAPPQHLIRVEGNLRAEYLNDINTFRHSVVVPYEPPEGSDCTTIHYNYMCNSSCMGGMNRRPILTIITLEDSSGNVLGRDSFEVRVCACPGRDRRTEEENF
Links
Other
p53
family TFs
Other
Ochotona princeps
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSTOG00000022774
Ictidomys tridecemlineatus
ENSSTOG00000022774
I
0.933
ENSOCUG00000001138
Oryctolagus cuniculus
ENSOCUG00000001138
I
0.923
TP53
Homo sapiens
ENSG00000141510
D
0.917
ENSPPYG00000007934
Pongo abelii
ENSPPYG00000007934
I
0.912
ENSAMEG00000016851
Ailuropoda melanoleuca
ENSAMEG00000016851
I
0.907
TP53
Pan troglodytes
ENSPTRG00000008703
I
0.907
TP53
Gorilla gorilla
ENSGGOG00000009786
I
0.903
ENSCSAG00000011345
Chlorocebus sabaeus
ENSCSAG00000011345
I
0.902
TP53
Macaca mulatta
ENSMMUG00000008639
I
0.902
ENSPANG00000024061
Papio anubis
ENSPANG00000024061
I
0.902
ENSP00000269305
Macaca fascicularis
ENSP00000269305
I
0.902
TP53
Canis familiaris
ENSCAFG00000016714
I
0.897
TP53
Callithrix jacchus
ENSCJAG00000014978
I
0.897
ENSMPUG00000009017
Mustela putorius furo
ENSMPUG00000009017
I
0.897
LOC100910954
Rattus norvegicus
ENSRNOG00000046657
I
0.894
Tp53
Rattus norvegicus
ENSRNOG00000010756
I
0.892
TP53
Sus scrofa
ENSSSCG00000017950
I
0.887
TP53
Tursiops truncatus
ENSTTRG00000010250
I
0.883
TP53
Microcebus murinus
ENSMICG00000014853
I
0.882
TP53
Otolemur garnettii
ENSOGAG00000016871
I
0.882
ENSOARG00000015571
Ovis aries
ENSOARG00000015571
I
0.881
ENSBTAP00000001420-D1
Bos grunniens
ENSBTAP00000001420-D1
I
0.881
TP53
Bos taurus
ENSBTAG00000001069
I
0.878
ENSNLEG00000009730
Nomascus leucogenys
ENSNLEG00000009730
I
0.876
TP53
Felis catus
ENSFCAG00000009623
I
0.866
Trp53
Mus musculus
ENSMUSG00000059552
D
0.866
TP53
Cavia porcellus
ENSCPOG00000014252
I
0.862
TP53
Dasypus novemcinctus
ENSDNOG00000005252
I
0.861
ENSMLUG00000006411
Myotis lucifugus
ENSMLUG00000006411
I
0.856
Myotis_brandtii_TP53_10021059
Myotis brandtii
Myotis_brandtii_TP53_10021059
I
0.856
TP53
Procavia capensis
ENSPCAG00000012725
I
0.851
ENSMEUG00000013135
Macropus eugenii
ENSMEUG00000013135
I
0.845
TP53
Sorex araneus
ENSSARG00000006206
I
0.845
ENSLAFG00000007483
Loxodonta africana
ENSLAFG00000007483
I
0.842
ENSSHAG00000015510
Sarcophilus harrisii
ENSSHAG00000015510
I
0.840
ENSOCUG00000022109
Oryctolagus cuniculus
ENSOCUG00000022109
I
0.825
ENSETEG00000008987
Echinops telfairi
ENSETEG00000008987
I
0.823
TP53
Erinaceus europaeus
ENSEEUG00000014573
I
0.820
TP53
Equus caballus
ENSECAG00000008126
I
0.768
ENSMLUG00000025140
Myotis lucifugus
ENSMLUG00000025140
I
0.763
Cmyd_10000491
Chelonia mydas
Cmyd_10000491
I
0.732
tp53
Danio rerio
ENSDARG00000035559
I
0.727
ENSLAFG00000032042
Loxodonta africana
ENSLAFG00000032042
I
0.724
ENSPSIG00000013302
Pelodiscus sinensis
ENSPSIG00000013302
I
0.722
ENSLAFG00000028299
Loxodonta africana
ENSLAFG00000028299
I
0.713
Pvit_02042
Pogona vitticeps
Pvit_02042
N
0.702
ENSLAFG00000030880
Loxodonta africana
ENSLAFG00000030880
I
0.701