CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rps-13
(
Caenorhabditis elegans
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
WBGene00004482
T312109_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C16A3.9
Paired box
25
72
WQKMTAEEVQDQIVKMAKKGLRPSQIGVILRDSHGVGQVRRLAGNKIF
Links
Other
Paired box
family TFs
Other
Caenorhabditis elegans
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_054950
Acremonium chrysogenum
ACRE_054950
N
BBA_01284
Beauveria bassiana
BBA_01284
N
CCM_01331
Cordyceps militaris
CCM_01331
N
CFIO01_08829
Colletotrichum fioriniae
CFIO01_08829
N
CGGC5_7247
Colletotrichum gloeosporioides
CGGC5_7247
N
CH063_02269
Colletotrichum higginsianum
CH063_02269
N
CHGG_09727
Chaetomium globosum
CHGG_09727
N
Cob_02783
Colletotrichum orbiculare
Cob_02783
N
CSUB01_02125
Colletotrichum sublineola
CSUB01_02125
N
estExt_fgenesh1_pg.C_sca_3_chr4_2_00062
Nectria haematococca
estExt_fgenesh1_pg.C_sca_3_chr4_2_00062
N
estExt_fgenesh2_pg.C_80410
Neurospora discreta
estExt_fgenesh2_pg.C_80410
N
e_gw1.10.422.1
Cryphonectria parasitica
e_gw1.10.422.1
N
F503_03844
Ophiostoma piceae uamh
F503_03844
N
FFUJ_13595
Fusarium fujikuroi
FFUJ_13595
N
FGRRES_06356
Fusarium graminearum
FGRRES_06356
N
FOXG_08110
Fusarium oxysporum
FOXG_08110
N
FPSE_01136
Fusarium pseudograminearum
FPSE_01136
N
FVEG_05033
Fusarium verticillioides
FVEG_05033
N
GGTG_05753
Gaeumannomyces graminis
GGTG_05753
N
GLRG_06666
Colletotrichum graminicola
GLRG_06666
N
HMPREF1624_08315
Sporothrix schenckii
HMPREF1624_08315
N
MAJ_07403
Metarhizium majus
MAJ_07403
N
MAM_00055
Metarhizium album
MAM_00055
N
MAPG_03839
Magnaporthe poae
MAPG_03839
N
MGG_00856
Magnaporthe oryzae
MGG_00856
N
MGU_00071
Metarhizium guizhouense
MGU_00071
N
MYCTH_2082522
Myceliophthora thermophila
MYCTH_2082522
N
NechaG99900
Fusarium solani
NechaG99900
N
PFICI_14412
Pestalotiopsis fici
PFICI_14412
N
PODANS_5_8610
Podospora anserina
PODANS_5_8610
N
S40285_02337
Stachybotrys chlorohalonata
S40285_02337
N
S40288_02128
Stachybotrys chartarum
S40288_02128
N
SAPIO_CDS5292
Scedosporium apiospermum
SAPIO_CDS5292
N
SPBR_04131
Sporothrix brasiliensis
SPBR_04131
N
THITE_2117428
Thielavia terrestris
THITE_2117428
N
TRIREDRAFT_60761
Trichoderma reesei
TRIREDRAFT_60761
N
TRIVIDRAFT_148539
Trichoderma virens
TRIVIDRAFT_148539
N
UCREL1_3884
Eutypa lata
UCREL1_3884
N
UCRPA7_2517
Togninia minima
UCRPA7_2517
N
UV8b_4562
Ustilaginoidea virens
UV8b_4562
N
VDAG_02169
Verticillium dahliae
VDAG_02169
N
VDBG_03266
Verticillium alfalfae
VDBG_03266
N
VDBG_03266
Verticillium albo atrum
VDBG_03266
N
VHEMI07669
Torrubiella hemipterigena
VHEMI07669
N